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53-2782-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 221459 [Map]; Strand: c
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2782-1 - 5-prime edge 
    ATCCATCCTC TTCCTTAAGC CTCTAATCTC ATCCTCACTC GCGAACGATT 
    CGATTACCAA ATACCCTTTT TTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 221619 [Map]; Strand: c
      • AT2G01490.1 - [+] show detail - phytanoyl-CoA dioxygenase (PhyH) family protein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2782-1 - 3-prime edge 
    ATCTTCTCCA CCAAAAATCA GGTTTTTATT TCTTTACCAA AGGTTTTGAT 
    TCAAAATCAT CATCATATTG TTATAAGAAT GGTTGTTTTG ATTATTGTAG 
    AAGCACACCA CAGATAATTA CCTTCTTTGA GAGCGCTGAG AAAATCTCCT 
    TCTTCTTTGA AGGTAACAAT ATTCCTACTT TTCTTCAATT GCTTAGATAC 
    TTGATTCTGT TTAGATATAA TCCAAACAAT TGTTTGGTAG TGAATCCAAA 
    TGAGTATGTT TTTACCGGTT TTATGTTC

AT2G01490.1

Model type
Protein coding
Short Description
phytanoyl-CoA dioxygenase (PhyH) family protein
Computational Description
phytanoyl-CoA dioxygenase (PhyH) family protein; FUNCTIONS IN: phytanoyl-CoA dioxygenase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phytanoyl-CoA dioxygenase (InterPro:IPR008775); Has 2926 Blast hits to 2921 proteins in 334 species: Archae - 4; Bacteria - 485; Metazoa - 347; Fungi - 101; Plants - 64; Viruses - 0; Other Eukaryotes - 1925 (source: NCBI BLink).
Link
InterPro Scan - TAIR