1. Home
  2. Mutant Lines
  3. 53-2797-1

53-2797-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208243 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2797-1 - 5-prime edge 
    GTGTTCACCA TCTATACAGC TAGAAGCTTC AGCATTAACA ACAGAAGAGT 
    TCGACGTCAC CGATTCATCC ATCTGATTCA AAGAAACCCC TTTAACAGTA 
    ATCGAATCTC GTTCGTTCTG AGTAGACTCG GTCGAGTCGA CGTCGAGATT 
    GAGATCCAGC ATCAATCTCA AAAAAGTCAA CAAAAAAAGC AAACAAAACT 
    CTGAGCTTTC ACAACAACAA CAAAAACTAT TTCTTCAAGC TCTTACTTAC 
    ACATTGATCA ATAAATTCAA CGATCGCCGT CGATTTGAAA TAAACAGAGC 
    TCATAAATCA CATTACATAG GTGAAAATCA GCACGAGTAT GGAGAAATCA 
    AACGGAGATT TAGATTCTGA AATCAATCAA AAACACGACG GAGGAGGAGA 
    AGGAATAATA ACCAAAGAGA AAGAAGGAAA AAGCTCAATC ACTAAGGAGA 
    GAAATGAGAT TGAGGAGACA TGGAGATGAA GAGTTGAGTA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24208356 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2797-1 - 3-prime edge 
    ATGGTGAAGA TGAGTTGTGC TCTACACGAA CGGTCAAGTT TCAATTTGAG 
    ATACTGAAAG GAGGAGGAGA AGAAGAAGAA GAAGAAGATG ATGATGAAAG 
    AAGTGCTGTG ATGATGACCT AAGGAGTTTT TTCCTGTTGC TAAAGGCATG 
    AACTTTATGG ATTCGAGCGC TCAAAGTTCA AGGAGCACCG TTGATATTTC 
    CTTCCAGAGG GGGAAACAAG GTGGAGACTT TATAGGTAGC GGGAGCGGTG 
    GTGGCGATGC TTCACGGGTG ATGCAGCCAC CATCACAGCC GGTGAAGAAA 
    AGCAGGAGAG GTCCTAGGTC TAAGAGTTCT CAGTATAGAG GCGTCACTTT 
    CTATCGGAGG ACAGGCAGAT GGGAATCGCA TATCTGGTAT ATCTACTACT 
    GATTGATTTA TCTTTTAGAT AGGTCTTAGA TGAGTTGTTG ATCTTTGGTC 
    GAAAATG

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR