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Mutant Lines
53-2800-1

53-2800-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 1469026 [Map]; Strand: w
- AT5G04980.1 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: intron5 (CDS)
- AT5G04980.2 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: intron6 (CDS)

CTTTCAATCT TGAGCTGTAA TTCGTTTCAG AACCAATAAA CCGGTTTAGC 
TTCTTTTTAT TTGAGTTTGT GATCAACACT AAAACTTGAT TTCTTGGGAG 
GAAAGGAACC GATTGTGAAA CCTGATCTTT GTTGAGAAGA GTGTCCCAAG 
CGTTTTTATC CAAGAGGGTC TTTGTTTCTG AGTAACTCAA AGCTATTCTG 
TAGTTCAAAT CTCCAAGCCA TATGACCCGA CTGATATTAA AATGCGGTAA 
GAAACCCCAA GATTAGCCAA GGCAGAAAAT ATTATTTGTG TTAACGATGA 
TATTTGTGTT CTTAAATCTT ACTCGTGCTT TGTGATTCGA TCAGGTACAC 
GAGTAAAAGA GGTTCTGCAG ATTCTAGGGA AAGTTGTGTT CTTGAGAATC 
TCAATCACAT CTGAGTTTCT GCGGCGTTCG TCTTCATCTC TCTTC

3 prime edge [+] show sequence

Chromosome: 5; Position: 1468910 [Map]; Strand: w
- AT5G04980.1 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: exon6 (CDS)
- AT5G04980.2 - [+] show detail - DNAse I-like superfamily protein
  Distance: 0; Region: exon7 (CDS)

ATTGAAAGAG ACGCAGGTCG AGTGTTCAAA GGATGGCATG AAGGAAAAAT 
CTTCTTTGCA CCAACTTATA AGTACTCTTA TAACTCTGAT GCTTACGCGG 
GAGACACCTA GCAAAGAAAA GAAGAACAAG AGAAGAACTC CGGCCTGGTA 
TATATAGTAA ACCGGATATA TTCTATTTCT GATTTTGATT GGTTTTGGTT 
CGGTTAATCT GAACCAGGCT TCTGTACATT TTCGTCAGGT GCGATAGGAT 
TCTTTGGCAC GGTGATGGAA TCCGGCAGCT CTCGTACGTG CGCGGCGAGT 
CACGTTTCTC CGATCACCGG CCGGTTTGCT CCGTGTTTGT CGTCGACGTT 
GAGGTTTGCG AGGGTAAAAC CGGAACTAGG AGACAATAAC TTACATCAAC 
TGTTGAAAAA CGTCTTGGTA GAATTAAGAT ATAATCTTTA CATTTATTAC 
GATACTACCA CTAGCGGGCC TTTGGAGCCC GCNAGAGTGT NTACTTTGAC 
GTTT

AT5G04980.1

Model type: Protein coding
Short Description: DNAse I-like superfamily protein
Computational Description: DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G65090.1); Has 2295 Blast hits to 2058 proteins in 223 species: Archae - 0; Bacteria - 0; Metazoa - 744; Fungi - 561; Plants - 687; Viruses - 0; Other Eukaryotes - 303 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G04980.2

Model type: Protein coding
Short Description: DNAse I-like superfamily protein
Computational Description: DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT5G65090.1); Has 2300 Blast hits to 2056 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 750; Fungi - 552; Plants - 689; Viruses - 0; Other Eukaryotes - 309 (source: NCBI BLink).
Link: InterPro Scan - TAIR