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Mutant Lines
53-2817-1

53-2817-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 20163219 [Map]; Strand: c
- AT1G54020.2 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT1G54020.3 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: 0; Region: intron1 (5UTR)
- AT1G54020.1 - [+] show detail - GDSL-like Lipase/Acylhydrolase superfamily protein
  Distance: 0; Region: intron1 (5UTR)

GTTGTTAAAT ATTTTACTTA AATCAATAAA TGATTTTATA ATGAGTTCGA 
TTAAAAATAA GCAATTGCAA CGGGTACTTC AATATTGCAA ACTCTTTTAT 
AATGTGTGAA AAGTTGGTAA AAACGTAACA GGGCTAGTAA TTGTTTTTTC 
AAAGGTCTCA ATCTGAATCA GCCTGATTTC TTTAATATTT TAACAACGTA 
TACAAGATGA ACACGCTCTT TATAGGTATA ATGCTATAAT GCATATCATT 
TAACCATTAA GAAAACTAGC TACTCGTTTT TATAGGTACT CTATACTAAA 
TGGAAATTTT GATTGGTAAT TAAAGATATA TGAAATTGAT GAGGGGTGAA 
TAAATCACAG CAAAATTCAT GGGGATACCA CACGATTTAC CGCCGGCGCT 
AAAACCCGGC ACCGATGTGT CACGAGGAGC CAGCTTCGCC GTCGGGTCCG 
CTTCCATTCT TGGATCTCCA AAAGATTCTG TAAGCTCACT TAAAATATTT 
GTTAATCAAT CGTAAAGCAA TGTCATAATA AAGATTCAC

3 prime edge [+] show sequence

Chromosome: 5; Position: 24054647 [Map]; Strand: w
- AT5G59700.1 - [+] show detail - Protein kinase superfamily protein
  Distance: 0; Region: exon2 (CDS)

GTTCCAGAGT TATGAAGGAA TACTCTCTGA ATGTAGCTAC GGATCATCTC 
GAGCTCACGT TTACTCCCTC GGGTGATTCG TTTGCAGTTT CTGAACACGC 
TCGAGGTTGT TTCGGTTCCT GATACAGTTG TTCAGTGGTG ATCCTTCCTT 
TGCAGGCAGT CCTGGGAAGT TTCAGGGCTT GTCATGGCAA GCTCTTGAGA 
CGGTTTATGG AGTGAACATG GGCGGTCCGC GTGTTACGCC TAGTAACGAT 
ACTCTTTCGA GAATTTGGGA GCCTGATTCT GAGTTTCTAG TTGAGAAGAA 
TCTAGTTAAG AGTGTGTCTA AGATTGCATC TGTTGATTAT GTTCCTGGTT 
TTGCTACAGA GGAGACTGCT CCTAGAACTG TCTATGGTAC TTGCACCGAG 
ATGAATTCTG CGGATAACCC GTCTAGCAAC TTNAATGTGA CTTGGGATTN 
CGATGTTGAC CCGGNTTTTC AGTACTTTCT ACGGATTC

AT1G54020.1

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G54020.2

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 3048 Blast hits to 3018 proteins in 88 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 2; Plants - 2967; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G54020.3

Model type: Protein coding
Short Description: GDSL-like Lipase/Acylhydrolase superfamily protein
Computational Description: GDSL-like Lipase/Acylhydrolase superfamily protein; FUNCTIONS IN: hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Lipase, GDSL (InterPro:IPR001087); BEST Arabidopsis thaliana protein match is: GDSL-like Lipase/Acylhydrolase superfamily protein (TAIR:AT1G54010.1); Has 2776 Blast hits to 2750 proteins in 64 species: Archae - 0; Bacteria - 18; Metazoa - 0; Fungi - 0; Plants - 2758; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59700.1

Model type: Protein coding
Short Description: Protein kinase superfamily protein
Computational Description: Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR