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53-2820-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: 53-2820-1 - 5-prime edge 
    AACTATTGGT GCTGTTTTAT GGAATTTTCA GATCAATTGA TAAACCTTTT 
    GGTTACGATA GAGAATAGAG AGGAGAGTCT TCGCGCGAAC ATCCTTTTCT 
    CTTTTAACGG CTTTTTTGAT CGAATCCTAT TTTATGAAGC AAACTTTTTT 
    TACTATTCAA TACTTACCGC GGTAAAAAGG TAAAAACAAA GGTAATACCA 
    AAGTGGATGA TTGACTCATT CCATACTAGA AAGAATCGCA GGAAATCTTT 
    TGATAACACG GATTCAGCCT ATTTCTCAAT CGTATCCCAC GATCAAGACA 
    ATTGGCTGAA TCCCGTGAAA CCATTTCAGA GAAGTTCATT GATATCTTCT 
    TTTTCTAAAG CAAATCGACT TCGATTCTTG AATAATCCAC ATCACTTCTG 
    TTTCTATTGT AACAAAAGAT TCCCTTTTTA TGTGGAAAAG GCCCGTCTCA 
    ATAATTCTGA TTTTACGTTT ACGTATGGAC AATTCCTCAC TATCTTGTTC 
    ATTCACAACA AAACATTTTC TTCGTGCGGT G

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 5758730 [Map]; Strand: w
      • AT5G17460.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
        Distance: 0; Region: exon2 (CDS)
      • AT5G17460.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: respo...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2820-1 - 3-prime edge 
    TATAGTTCCT AATTACGAAG CTGATGTAGT TTCTCTGTTT TAATTGTAGA 
    TCACAAAGTC GCTTGCTTTC GTGTCCGACA ACTTCTGCTC AAAATTGGGT 
    ATTTGCTGAG TTTCGTCAGA CTATACAAGG TTTCATCTCN CTCGACG

AT5G17460.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G17460.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress.
Link
InterPro Scan - TAIR