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53-2823-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19684053 [Map]; Strand: w
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 1662; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1013; Region: intergenic
    Flanking Genome Sequence: 53-2823-1 - 3-prime edge 
    ATTTTCAGTG GCAAGTTAAA ACAATCGTAG AAGCCTTTTA CATGGTTTTG 
    ATGAAAAGAC AATTGATTTC GGTTCGGCGT TCATGGTTTT GAAATTACAT 
    GTGATTTCTG TTTGGTTTAC ATGGTTTTGA AATGAAAATT GATTTTGGTT 
    CGGTTTGCAT TAGAATTAAT ACNGGTTTTG AGAAAAAAAA AAAAAAAAAA 
    GNNCCCCCCG GGNNTTTTTN AAANCNAANC NNNNAAANNN AAAAANGGNC 
    TNNNTTTNGG GGNTTCCCCC CCCNAAAANT CCCCCCCCCC CCCCNNCCCC 
    NGGNTTNNCC CAAGGGGCCN GGNNTNGNNC CCCNNNCCCC AAANTNGGNC 
    CANGGGGNCT TTTNTNAGCC CCCNTTNTNG GNNAAAAAAA AAAAAAAANG 
    GGGGGGCCCC CCCCCNTTTT TTTTTNNTTT TCCCCCTTNN NCNANNNAAA 
    AAAGNGGGGG GGTTNAAAAA NCCNNNGGGT TTTTTTNGGG GGTTTNGGGT 
    TTTTTNAAAN NNTTNNTTNN NGGCCCCCAA AAAAAANNAA ANCCNNTTTT 
    TGNNAACCCA AAATTTTNTT TTTTTTTTTN NTTNCCCCCC NTTNAAAANN 
    NANTTCCCNN NNCCCCCCNN AAAAAANNAA GGGGGGNGNA TTTTTTTNNA 
    AAAANGGNAA AANNGGNAAA ANNNNNCCCC CNTTTNNGNN NAAAANGNNT 
    NCNNNCCNTN NGGNANAAAC CTNCCCCCCN NAAAACCCCC CCC

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR