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53-2829-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23229254 [Map]; Strand: c
      • AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-2829-1 - 5-prime edge
    TCCAAAAGCA AGTGAAAATA AATTCTTTAA GCAACCAAAT ATAAAGAAAA 
    CATTGGTATA TTTTGTCAAT GGTTTATCAG TGTTAACGAA GAAGAATAAT
    TAGACCTAGC TAAAAGTGAA ATCAGTAAAT CTCGTAAATA ATAATAACGA
    TAAATCAGAT ACAAAAAGAA AATAAAAAAA TCAAGAAGAA GACGAAGAAG
    AAAAAAGAAA GAGTCAGTGA ATTAACAAAA ATCAAGAAGA GGTTCGGTTA
    ATACTAAGTC CTTGAAAGAG CCAATGAGGT CTCTTCTTCC
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23229370 [Map]; Strand: c
      • AT5G57340.2 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 167; Region: intergenic
      • AT5G57345.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 37; Region: intergenic
    Flanking Genome Sequence: 53-2829-1 - 3-prime edge
    CTTTTGGAGA CCAATGAGGT CATACACTAG AACCTAAAAT ATAAAGAATG 
    AAGGAAAAAC AGAGAAAATT TGTATATAAA TTTAGTATTT GGAGGTGTTT
    TCAAATTGCC TCTATTAACT TTAAGATGGG TCTTTAGTTA CTTATTTCAA
    GATTTCCACA TATATCCGTC TTCTTCCNTN ATATTTTTTT ACACAAAATC
    GTATGTATGA CTATTGTTAC ATAAGCCTCT CTCCGTTTTC TCCTCTAATA
    GTCGTCTTCG TCATCTTCAT C

AT5G57340.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57340.2

Model type
Protein coding
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57345.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR