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53-2835-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22980209 [Map]; Strand: c
      • AT5G56840.1 - [+] show detail - myb-like transcription factor family protein
        Distance: -484; Region: promoter
    Flanking Genome Sequence: 53-2835-1 - 3-prime edge 
    GCCCCTTTGT TGTTTGTTTC TCTATTTTAC AAATTTGTAA ATTATATTTT 
    TGTTATGTTT CTTTCCACAT TTTTATTAGG TCATCCAACT ACCCACCTCC 
    CCAAAACTAT TGGAGGATCC AAGTCCTCTC TCTCTCAACC ATATATCTTA 
    TATTTCCTTT GCAAAAGGAT AGCCTTTATT ATTTAATACA CATAGATTCC 
    ATTATTGTTA TGGCTACCTC ATTCTATTCT ATAAAGCATA CATATGAGAA 
    GAAGAAGCAA AATATAGACT ATGTGAAAGA TAAATGAATA TTTCATATTT 
    GTGAGACAAA TTAATTAGAT TAGAATTAAC ATTTTGTAGC TAGTCCATAT 
    TAGTGATAAA TTTCCACTTA TAAAGACATA TTTTCCTCTT TTGTTTTTTA 
    TACGTAAGCT TGTCTTCTTA TTGGCTAAAA GTAGAAAACA CCAACTTGGA 
    CAACATCATT TAAATTATAA AACCCTCCAA TAAATAAAAC TTGGTTTATC 
    CAATCATCTT ATTTCTCTGT GCTCTCCACC ATTTTACATA AACCCCAAAA 
    TCTCTCTTCA TCATCATCAT TCATCAACA

AT5G56840.1

Model type
Protein coding
Short Description
myb-like transcription factor family protein
Computational Description
myb-like transcription factor family protein; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), Zinc finger, CCHC-type (InterPro:IPR001878), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: myb-like transcription factor family protein (TAIR:AT5G47390.1); Has 1025 Blast hits to 1022 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 894; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).
Link
InterPro Scan - TAIR