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Mutant Lines
53-2840-1

53-2840-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 1; Position: 24393599 [Map]; Strand: w
- AT1G65610.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
  Distance: 0; Region: exon2 (CDS)

AGACTCGTAG TATCCCCCGA CCAATCCTCC TACCACGTCC GGCAGCCCAT 
CCTTCGTCCC TGAATCACCT CTCCATGAAA CCTTATTCTT CTTCGGCAGC 
TTACCAGCTA CAATATCACA TTTTCATTAT TCATCATTCA TCTTTTTTTC 
CATATCATCA ATATTTTTCA CTCAGTTTTA ATTCCTCTAA TGCTTACCAT 
TTAGATTCTA ATATTTTTAT AGACATGAAT GATACACGAT AGAATTCTTG 
AATAATTTCT TAGGTCAAAT ATGAAAATGT GGCTCGACAT ATTGGTGTTA 
GTTTAGTGTT TTG

3 prime edge [+] show sequence

Chromosome: 1; Position: 24617913 [Map]; Strand: c
- AT1G66130.1 - [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
  Distance: 983; Region: intergenic
- AT1G66140.1 - [+] show detail - zinc finger protein 4
  Distance: 1924; Region: intergenic

TCTATTTTCA GTATTTTTTC AATAAATTAT CAGAAACTTT TTGAAAACAT 
AAAATGTAGC TTACATTGAT ATAGCTTATA GGTGCTATAG GTTTTCAATA 
TCAGGAGATT TTTAAGTAGA CTTTAAAATC ACTAGTTCAA TAACATTATA 
TATCATGAAA CNTTTTAAAA ATCTATGACT TGGATAACAT AGGATTTATT 
ATTTTAATAC AAATCATTTG AAAATGTTTG ATTGAATACA CCCTTTTAGT 
TGTATGAAAC ATGCAATGAT TTATTCATCT CACTTCGACG

AT1G65610.1

Model type: Protein coding
Short Description: Six-hairpin glycosidases superfamily protein
Computational Description: KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G66130.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Computational Description: NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), NAD(P)-binding domain (InterPro:IPR016040); BEST Arabidopsis thaliana protein match is: Oxidoreductase family protein (TAIR:AT4G09670.1); Has 9966 Blast hits to 9965 proteins in 1788 species: Archae - 209; Bacteria - 7166; Metazoa - 212; Fungi - 379; Plants - 93; Viruses - 0; Other Eukaryotes - 1907 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G66140.1

Model type: Protein coding
Short Description: zinc finger protein 4
Curator Summary: Encodes a zinc finger protein containing only a single zinc finger.
Computational Description: zinc finger protein 4 (ZFP4); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger protein 7 (TAIR:AT1G24625.1); Has 1119 Blast hits to 1118 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 4; Plants - 1103; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link: InterPro Scan - TAIR