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53-2846-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24386175 [Map]; Strand: w
      • AT5G60680.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2846-1 - 5-prime edge 
    TAGTTAAGGG TCCCTTATCC AGTTTATCCA AAAAACCTGT ATAAAACCAA 
    AGACTCCCTC ACGACTAATT CTTCTTCTTC ATTAGCAGAT TAAACAAATC 
    TCAACATTCG AATTTTTAAA AATTCTTCAA AATCTCTTCT TCAATGGGCG 
    ACGGGAAAGA GTTACTACGC TAGGCCTAGC TATCGATTTC TCGGCACCGA 
    TCAGCCGTCT TACTTCACCG CTTCCGATTC A

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24386107 [Map]; Strand: w
      • AT5G60680.1 - [+] show detail - Protein of unknown function, DUF584
        Distance: -38; Region: promoter
    Flanking Genome Sequence: 53-2846-1 - 3-prime edge 
    ANTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATT 
    TAACTTCTAG TTTCCGTCAG TTGTGAAAGT ACGTAAATAC CCCTTGGGTT 
    TTAAATGAGA TTTTAATGAA GTGTCGAAAA ATGCCACGAA TTGCGATGGA 
    TTTTTTTTCG GAGTTGGAGA ATATTACATG TGTCGTGTTT GGCATATTCT 
    TTACCACNTT CAAAACTTTT AATTCATCTG TCTCTCGAAA AAGTAAGTAT 
    CTAGACTTTA AATTTTTGCC ACTATTATAT CTAAATGGAT TTTCTACTAC 
    CGAAAGTAAT TGTCTTTGTA TGAAGGAAAA TCAAAAAGTT TCACTCAAGA 
    AATTGTAATC CACACTTTTT TCATTTAGTA TATGTGGTCA ATAATATCAT 
    TCTACATTAT GGCACAATGG TTGAATGATT TTTCATCGGA GTGAAAGACT 
    GTTGTTTTGG AGTTATTATA TAGTTACAAT TTTAAATATT AAGATTATAC 
    AAGAATACTT GAAGAAATTG ATAAAAAAAT TCAGATTGCA TGGACGGAGA 
    ATATTATGGA ATATATAATA GTATAATAAT AGAAGGCTCT CGACCGTTTG 
    GAAACTTACG AGGTTGGTCG GTGTGATCGG CGCGGGGAAC CAGAACCGTC 
    GAAGATTACA TCATGGCTCG TTATTTTTAG CCGTTCCACA CTCTATTTTT 
    TTTATGTCTT TAGTCATCTT TCCTTACCCA ATGAAAACAC TCTGCACAAA 
    GCT

AT5G60680.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF584
Computational Description
Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR