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Mutant Lines
53-2863-1

53-2863-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1748567 [Map]; Strand: c
- AT1G05810.1 - [+] show detail - RAB GTPase homolog A5E
  Distance: 0; Region: exon1 (CDS)

AAATCTGAGC CTTGACCTCT TTACCTTCAA TCTCCATGCT CTGCGTCTGA 
AACTCGACTC CGATCGTCGC CTTGGAGTTA GCAGCTGAAC TCGTTACGTG 
CGTAACGAGA TAGAAGATTA GATTTACCGA CGGCAGAGTC GCCGATAACA 
ACAATCTTGA AGAGATACTC CTCTCTTCCT TCGTCGTCCG AAGACATCGC 
TCGCTTCACC GTCTTCTTCT TCTTCCCTAG GTTTCTAGAG AGAGAAGTAG 
GACTGGTTTG GAGAGAGAGA GAGAGGGAAA GAGGAG

3 prime edge [+] show sequence

Chromosome: 1; Position: 1748693 [Map]; Strand: c
- AT1G05810.1 - [+] show detail - RAB GTPase homolog A5E
  Distance: 0; Region: exon1 (CDS)
- AT1G05820.1 - [+] show detail - SIGNAL PEPTIDE PEPTIDASE-LIKE 5
  Distance: -989; Region: promoter
- AT1G05820.2 - [+] show detail - SIGNAL PEPTIDE PEPTIDASE-LIKE 5
  Distance: -989; Region: promoter

ATCACTGCTG GTCAGGAGCG TTTCCGTGCC GTCACTTCCG CTTATTACCG 
TGGCGCTGTC GGTGCCCTCG TCGTTTACGA CATTACCCGC CGCACCACTT 
TCGAAAGCGT TGGACGTTGG CTCGATGAGC TTAAGAGTAA GTCTCGATGT 
GAATTATGCG ATTGACTATC GATTTAGGGG ATCCTCATGA TCTAATTAGG 
TCGTACGGAT TGACTTAGAA TTGGGAAATT TTGAATCTAG TTTTGGTAGA 
TTATAGAATT TGTGACCTAG CTAGAACAAA ACAGAGGATT ATTCAAGAAC 
CGCTTAGGAA AGTATCTCAT AATGAACATC TTTAGATTGG TCTGAGATCT 
AAAATTGATT CATTTGCTCT TTTCTTGGTT GTTTCAGTCC ATTCGGATAC 
GACGGTGGCG AGAATGCTGG TGGGGAACAA GTGTGATCTA GAAAACATAA 
GAGCAGTGAG CGTGGAGGAA GGAAAGGCTC TAGCCGAAGA GGAAGGACTC 
TTCTTTGTGG AAACATCGGC TCTTGATTCG ACTAATGTTA AAACAGCTTT 
CGAGATGGTG ATACTTG

AT1G05810.1

Model type: Protein coding
Short Description: RAB GTPase homolog A5E
Computational Description: RAB GTPase homolog A5E (RABA5E); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579), Rab11-related (InterPro:IPR015595); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog A5D (TAIR:AT2G31680.1); Has 27587 Blast hits to 27548 proteins in 749 species: Archae - 23; Bacteria - 136; Metazoa - 14522; Fungi - 3761; Plants - 3260; Viruses - 20; Other Eukaryotes - 5865 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05820.1

Model type: Protein coding
Short Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5
Computational Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G05820.2

Model type: Protein coding
Short Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5
Computational Description: SIGNAL PEPTIDE PEPTIDASE-LIKE 5 (SPPL5); FUNCTIONS IN: peptidase activity, aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system, integral to membrane; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase A22, presenilin signal peptide (InterPro:IPR006639), Peptidase A22B, signal peptide peptidase (InterPro:IPR007369); BEST Arabidopsis thaliana protein match is: SIGNAL PEPTIDE PEPTIDASE-LIKE 3 (TAIR:AT2G43070.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR