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53-2878-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 367505 [Map]; Strand: w
      • AT4G00880.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -231; Region: promoter
    Flanking Genome Sequence: 53-2878-1 - 5-prime edge 
    NNTATNNNTA TATANCANAN NNTGCTACTT TGTGCNCNAG ACNCNTTNNC 
    ANNNNCANCN CTGTAAGAGG CCNTTNNNNA CNTAAGACAT AACCATANGT 
    NGGAGATGAC GGCANANNTT NTATCGATAT TTACTANGGN TATTANCGAT 
    GCGNCATCNA NNANGATNGC NTACCNGGGC NTATTNACTA TNATNANNTA 
    CTAGTAAATA TATATAATGT CTAAAGAAGA CAATGTCTAA TACATCTTTC 
    TCATTCAGCC AAACAAAAAT ATTTGAGAGA AACATTATAA TAACTTGAAT 
    TTTGCCAGTA ATTTGCGTTA CCGCTAATAG TGCATTAATC GAGTTTTAAA 
    GAAATAGATG ATATATTATT ATCGAAAAAC GAATCAATGC GTAAATCTTT 
    GGCGATATAT AATTTTAAAG AGACACTTTT TAAATGGGGA CAAGCGAATT 
    AATGGATGTA CATATAATTG TACAAAAAAG CCAACCTCAT AGATTGTTGG 
    AATATCTAAG TGGGGAATAT TATTTTATAG GTAAATTCCC ACTTGAAAAA 
    AATAATAATA TTATGCCATA TGCTTTTTAC TTTTTATAAT TTTCTGAAAG 
    ATATTTTCTT AGCCTGTCAG GAAAAAAAAG GTTAAATGGG CCGTCAAGTG 
    CAGGCCTGTA TTTGGGGGCT AATACTTNGG TTAATTGNGG GCTAATAGCC 
    TAANACTTTT TCTNTTNANA ATTAAATGTN G

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 367397 [Map]; Strand: w
      • AT4G00880.1 - [+] show detail - SAUR-like auxin-responsive protein family
        Distance: -123; Region: promoter
    Flanking Genome Sequence: 53-2878-1 - 3-prime edge 
    ATATATGTAA GGTTAAAGTT TGTTTGATGA GTGCTTAAAT TCGATATTCT 
    ATTTAAAATT ATATCTCTAT TCGCTAAGGA TTCAAATTCA AATAAGAGAA 
    AAAAAATAAA AAGTAAATTA TGCCCACCCC AAACTTTGCT ATATATACAA 
    GAAATATCAC CTTCTCTTTA AAACCAATTA AAGAGACGCA TTTAAAAGCA 
    AATGACCAAC AAGCGACTTC ACCATCCATC TCTTACAACC CTCCAAGAAC 
    ACTGGCTGTT TTCCTTCACT TTCTAGACAA AACAAAAACC ATCTTCTAGA 
    GAAAATAAAC CAACATGGGA GAGACAGAAA CCATGGCAAC AAACTAACTA 
    AACCATAGTA TATATTATCT ATACTAATAT TATCGGCCCA TGGGTAACGG 
    AGACAAAGTC ATGAGCCACT GGAGCTTCCA CATCCCACGT CTCCATCATC 
    ATGAGCATGA TCATGAAAAG GTACCAAAAG GGTGTTTGGC AGTGAAGGTA 
    GGACAAGGAG AAGAGCAAGA GAGATTTGTG ATTCCCGTTA TGTACTTTAA 
    TCATCCTTTG TTTG

AT4G00880.1

Model type
Protein coding
Short Description
SAUR-like auxin-responsive protein family
Computational Description
SAUR-like auxin-responsive protein family ; CONTAINS InterPro DOMAIN/s: Auxin responsive SAUR protein (InterPro:IPR003676); BEST Arabidopsis thaliana protein match is: SAUR-like auxin-responsive protein family (TAIR:AT2G46690.1); Has 1421 Blast hits to 1407 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1420; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR