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53-2899-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24212474 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2899-1 - 5-prime edge 
    GCATCATTAT CATCTTTCTC GACAGCAGCT TCATCAGCAT AATCATCACT 
    ATCATTGTCT TCACCACAAT TATAATCAGA ATCGTCATCA TCCTCATCAA 
    GAGATAAAAC ATCATCACTG GCCTGATTTT GTTCATCACT ATCAGATTCC 
    ACTTTGATCT CCTCGCTTTG ATCTGAACTT CTTCTTATCT TTTTACACAT 
    TGTCCTATGC TCATAGATAC AGAAATGGAA ACAACTAGAG CCATCAAACT 
    CAAACTCTAA GAAATCTCCT CCCTTGAGAT CTTCGTCCTT CACAATCCTC 
    TTCCACCCAT TAACCATAAC GAATTTCTCA GTATCATCAT CACCACAACA 
    TTTCTTTAAC TCCAATTTCC AAATATTTCC AGAAATGCTT CTAACAGTTA 
    CAGTTTCAGG CAAAGACTTT GGTAAAAATC TGGTGAAAGA AATGGGTAGT 
    ACCTGCATTA TACAATCTAA AAGTTGCAAC CAAATAGAAA TCTACAGAAG 
    AACATNTGAG AAAAACCCAC AAAAAAAACA GAGAGAAGAG AAGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24212350 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon2 (CDS)
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-2899-1 - 3-prime edge 
    TCATCATGAA GATGTTGATA ATGATGCTGA TGATGTTCCT GTTGAAGATG 
    ATGATTATGT TGAGGCTTTT GATTCTAGAG ATCATGCTAA GGCTGATGAT 
    GATGATGAAG ATGAAAGACA GNATCTGGAT GATCCCGA

AT5G60130.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR