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Mutant Lines
53-2915-1

53-2915-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 4; Position: 722321 [Map]; Strand: w
- AT4G01680.2 - [+] show detail - myb domain protein 55
  Distance: -4906; Region: intergenic
- AT4G01690.1 - [+] show detail - Flavin containing amine oxidoreductase family
  Distance: -7566; Region: intergenic

CATCCATATG GTGGCTAGCG TTGTATATAT TAAAAATAAT TTATTTTTAG 
ACAAGATACA ATTTACAAGT CAAATATTTG AGGAAGCTAT CCTATAAATG 
GTTAATGGTT ATAAAAGACT TATTATAAGG ACCCCACGCA TAGAGGGTCG 
AGGCTCCAAT AATACTACTC TTTATAATAG TATTCAAATG TCGTGCCAAA 
AAAGAAATGT CTTATACGTG ATATCCATAA ACAACTATAT GCGTGTGCGA 
TAGAAAAAAA GAAGAAGATT TGTCATCTTC TTTTTGGTTC TTTCAAAATG 
TTTTCCATCT AGTGCATGTC CCCCGACGAG ATTCACTTTC TCGACTCAGT 
TGATATCTCA TATTTAGTGC TTTCATGCAA AAACAATTTT GAAACGTAAA 
ATTATGTAAA ATGTTTTCGA GGAAAACATA TTTTGTTTAG TGATTATAAA 
ACAAAATATC TATTTG

3 prime edge [+] show sequence
1. Chromosome: 4; Position: 722205 [Map]; Strand: w
  - AT4G01680.2 - [+] show detail - myb domain protein 55
    Distance: -4790; Region: intergenic
  - AT4G01690.1 - [+] show detail - Flavin containing amine oxidoreductase family
    Distance: -7682; Region: intergenic
Flanking Genome Sequence: 53-2915-1 - 3-prime edge
```
TATGGATGAA AGANAAAGTA CCTTCATAAT TCATATTACT AAATTTTTAA 
TATAAAGTGT TTGCAAATAT TGGAAAAAAA TATGGNTCAG ATATCTAAAG 
AATAATGT
```

AT4G01680.2

Model type: Protein coding
Short Description: myb domain protein 55
Curator Summary: Encodes a putative transcription factor (MYB55).
Computational Description: myb domain protein 55 (MYB55); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 61 (TAIR:AT1G09540.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01690.1

Model type: Protein coding
Short Description: Flavin containing amine oxidoreductase family
Curator Summary: Encodes protoporphyrinogen oxidase (PPOX).
Computational Description: PPOX; FUNCTIONS IN: oxygen-dependent protoporphyrinogen oxidase activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Protoporphyrinogen oxidase (InterPro:IPR004572); BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family (TAIR:AT5G14220.1); Has 2258 Blast hits to 2244 proteins in 787 species: Archae - 6; Bacteria - 1416; Metazoa - 200; Fungi - 137; Plants - 154; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink).
Link: InterPro Scan - TAIR