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53-2924-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129523 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2924-1 - 5-prime edge 
    CTGNCGATAC ACTTTCTTGC GGTAACAAAA TCACACTGAA GACATACATA 
    CGCCGTAAAC TGGCATTTCT TCCCACAAAC GTCACAGATA CATGAGATTC 
    TTCTAGGTAA GAGAGTAAGT GGGTGTTTGT GGGTCGTCAT ATGCGCAATA 
    ACAAGGAGTG GTGGGTTTGT GGNACAACCA AGGCACGANG TGAAATTGCA 
    AACGGAACAA TGATAAAGCA TATTTTCAGC TGGTATATTT CCACATAAAA 
    GACAACTTTT CTCGGCATCA TCCGTAAGTG ACTCAGATGT GATTAACTTG 
    AGAGGATGAA TAGAATGACA AGGATGATTT ACCTCTTCCG AGAGATGGAC 
    GCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24129639 [Map]; Strand: c
      • AT5G59920.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2924-1 - 3-prime edge 
    ATCGACAGGC CCCGTGTCAT CAATATCAAT CGTCATGATC ATCGCATATA 
    TTTAACTCAT CATCTCGGCA CTGGGTATTC GGAATGCGGA GTTTGTCACA 
    AAAATGTAAG TCAGTACAAG GGGGCTTACT CTTGCTCTGT TTGCCCTAAC 
    TATGCTTGTT CATTCTACAT GTGCCGTGAG AACTGACGTA TGGGATGGCG 
    TAGAATTGGA AGGGACCACT GAGATCACAG AAGACATTTC ACCATTCAAG 
    GTGGTGGGTG ATAACTTGAT ATGCCATTTT AGTCATGAAG AGCATCAATT 
    AAAGCT

AT5G59920.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Curator Summary
Isolated in a screen for UV-B insensitive mutants using a hypocotyl growth inhibition assay. Mutants are defective in a number of UV-B responses.
Computational Description
UV-B LIGHT INSENSITIVE 3 (ULI3); CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT4G01350.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR