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53-2932-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13274941 [Map]; Strand: w
      • AT2G31150.1 - [+] show detail - ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylati...
        Distance: 363; Region: intergenic
      • AT2G31160.1 - [+] show detail - Protein of unknown function (DUF640)
        Distance: -2870; Region: intergenic
    Flanking Genome Sequence: 53-2932-1 - 5-prime edge 
    CCTGCCCGTC TGCCCTGTTT AAGTAATTAG TGAACTTCTA GATTTCACAA 
    TCTCTAACAA AATAGTTTTA CTCAATTAAA GTTTTGCTGC GTAAGCAGAA 
    TGATTAACAA AGAGAATGGT ATTTGTTTTC TGATTTGATG AGCGTGATAT 
    ACNTGATACT ATAGAATTTG TCAACTCGAT CACGCGAGAA GTATGTAGAT 
    TGTCGATAGG TGTAATTATT AGAGTTAACG AAAAATTCGA GTAGCCAAAC 
    TTGAGATGCA AACAAAGCCT ACAAATGCAA ATTTATCAAA ACCTATGTCT 
    CGTCTCGTCC ATAAACTAGT CATTCTCTTT TCAAGAATTG TATACTTGAA 
    TTTGAAACAA TGTTATTATG AACTTGTTGT AAATGTTTTC ATATGTCCAT 
    GGTAATTGAA AATTGAGGTG GCATTAAACT GAGTGCATGT TTCTCTAGAA 
    ACAAAACTTA AAGTGACACG AGGTCGGTGT AAATTTGTTT GTGTGTTGTG 
    AAATTACTGT CCTCATTTAG TAATGTGACA TTGACTGATG TCAGGTCCCA 
    TCTCTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 13274825 [Map]; Strand: w
      • AT2G31150.1 - [+] show detail - ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylati...
        Distance: 247; Region: intergenic
      • AT2G31160.1 - [+] show detail - Protein of unknown function (DUF640)
        Distance: -2986; Region: intergenic
    Flanking Genome Sequence: 53-2932-1 - 3-prime edge 
    CGNGCAGGGA ACAAAACGCT TCCACATTTC TTTTATCTTC TTTTCTCTAG 
    NCCTCTCCTG TCTTTATCTT AAAAAAAGTT ACACCCTTTT CCAATTTCTG 
    TTGATACTTT AAGAAACCT

AT2G31150.1

Model type
Protein coding
Short Description
ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism
Computational Description
ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism, ATP binding; INVOLVED IN: ATP biosynthetic process; LOCATED IN: membrane; CONTAINS InterPro DOMAIN/s: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757); BEST Arabidopsis thaliana protein match is: Rho termination factor (TAIR:AT1G06190.1); Has 4089 Blast hits to 2894 proteins in 305 species: Archae - 6; Bacteria - 297; Metazoa - 1270; Fungi - 266; Plants - 187; Viruses - 62; Other Eukaryotes - 2001 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G31160.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF640)
Computational Description
LIGHT SENSITIVE HYPOCOTYLS 3 (LSH3); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF640 (InterPro:IPR006936); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF640) (TAIR:AT1G07090.1); Has 309 Blast hits to 309 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 12; Fungi - 0; Plants - 297; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR