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53-2933-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215756 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -303; Region: promoter
    Flanking Genome Sequence: 53-2933-1 - 5-prime edge 
    ATACTAAGAT ACTTGGAACT CTGCCACTTA ACACTATCTC ATTCTTCTTT 
    CAAGTTTCAA GTTTCTTGTT CAAGAATTGA GATGTCACAA GTCCTTCTTT 
    CTCTAATATA CCCTTCTCGA CTCTTTACNT GTGGTTCTTT TGTTTAAGGA 
    CGATAATGTC ATTTACACGA TATAGATTGA ACCAAACTTA AGGCCCATTT 
    CTTGTTTTTT GTTTGGGCCT TAGCGATACC TTGGTCCGCT TAACGAATTA 
    TTTTTGAATA AGAAGAGTAC TATTAATGGT TTGTTTTCCA TTTGAAGGAA 
    AAAGCATCGA AACAGAGAGA ACCCTCTGTT TTTGCAAGTT TTTGCTACAA 
    AAGGCCAACA CCTTTAGATC AAATCACATC TGGAAAAACT TGGATCTGGA 
    GAAACTTTGT TCACCTTTTT ATTTCCGATC AAAATTAGGG TTCAGAGTAT 
    TTCCAAGAGC ACAAGAAGTT GACGACAATG AACACAAGAG GTTTTTCACT 
    TCTCTGTTCC TGATTCTTCC CTTGTAATGT GCTCTGTACA TTGATGTTCT 
    TCCTTTTCTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24215869 [Map]; Strand: c
      • AT5G60140.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -416; Region: promoter
    Flanking Genome Sequence: 53-2933-1 - 3-prime edge 
    CTGAGNCCCN GNCGCCCGGT ATGCCAAGTG CCTGGGCCTN ATGATCACAN 
    NNNGAGTCAT AACATTCTTT TTATATGAAC TCGCAGGTTT TAAACAGCCC 
    TGATGTGTGA ACCATTCATA ATGATTTCTC CCAAAATCTA TAGCTCTAGT 
    ATACATTATT ATTGTAAGAC TGTGTTGATC GTCTTTTGCA CTTCATGTTT 
    CAGACAAACA AACAAAATCA AGAAGTGTAT AGAAAGCATC AACATCGATT 
    ATGTTCCGAG AAAACCAATA AGATTCATAA AACCAAGTAC TCTACTCATA 
    TAAAAACTCT CAAGTAAAAA TAGATAATGT CTTGGAGTTA ACGCATAAAG 
    CCTTATCAAG AGATCATCCT CTTATAACAT GGACCTTGAT TTCTCGAACA 
    AGACCATCCA TCTCCTTTTC TAACTCACAA ATCACCTTGT CATTCAACTT 
    CACATTATTC CTTCTGATTA TACTACGGAA TCCCTTGATT GTTTGACCCT 
    TAACTTTCCT CTTCAATTTA CCAAAGTTTT TCTCGAGTGG ATCAATCAAA 
    TTGATGAACT CAGGGAAGTG TAAGCCATAC TTCGTTATGA CCTTAGTTGG 
    TATGCGCAGC TGCATTACAA AGATAACATC ATAAAACAGA AGTGGTACAT 
    TATTTTAATG AAAATGCAAA AGACATGGAG ACTTTCTTCA CATTTCTTAC 
    CATATTATAT TTTATTTGCC GATGTTGGT

AT5G60140.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR