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53-2945-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 648806 [Map]; Strand: c
      • AT2G02450.1 - [+] show detail - NAC domain containing protein 35
        Distance: 0; Region: exon2 (CDS)
      • AT2G02450.2 - [+] show detail - NAC domain containing protein 35
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2945-1 - 5-prime edge 
    AGTACGAGTG CCTTTAGGGG CTTTACCAGA GTAGAAAACT AGGGTTTTCT 
    TTAATCCGAT AGGCCGAGAA GTCTCCGATC TGATCATCCT ATCAGCTCCG 
    GTGGCTTTCC AATATCCTGA AGTCGTTACT CGGTTCGGTC TATCTCCATT 
    TCTATATTTC ATCTCACTCG AC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 648922 [Map]; Strand: c
      • AT2G02450.1 - [+] show detail - NAC domain containing protein 35
        Distance: 0; Region: exon2 (CDS)
      • AT2G02450.2 - [+] show detail - NAC domain containing protein 35
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2945-1 - 3-prime edge 
    CTCGTACTAG TTGGATCATG AACGAGTATC GTCTTCCTCA CCATGAAACC 
    GAGAAGTACC AAAAGGTATT AATTCTACTA ACTCTATATA TATCCTATTC 
    ATACGTACAT AGATATAACC CTAGCTAGGA ATGTGAGGCC TTTAAAATTG 
    AAATTAATCC CTAGACAGTT TGAATTTTTT NTTTTTTTGA CTAGTTCTAT 
    TTATTTATT

AT2G02450.1

Model type
Protein coding
Short Description
NAC domain containing protein 35
Computational Description
LONG VEGETATIVE PHASE 1 (LOV1); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 4817 Blast hits to 4369 proteins in 130 species: Archae - 0; Bacteria - 5; Metazoa - 115; Fungi - 57; Plants - 2924; Viruses - 0; Other Eukaryotes - 1716 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02450.2

Model type
Protein coding
Short Description
NAC domain containing protein 35
Computational Description
NAC domain containing protein 35 (NAC035); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 94 (TAIR:AT5G39820.1); Has 5401 Blast hits to 4721 proteins in 140 species: Archae - 0; Bacteria - 7; Metazoa - 144; Fungi - 68; Plants - 2924; Viruses - 5; Other Eukaryotes - 2253 (source: NCBI BLink).
Link
InterPro Scan - TAIR