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53-2948-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3953509 [Map]; Strand: w
      • AT4G06700.1 - [+] show detail - transposable element gene
        Distance: -2907; Region: intergenic
      • AT4G06702.1 - [+] show detail - transposable element gene
        Distance: 3673; Region: intergenic
    Flanking Genome Sequence: 53-2948-1 - 5-prime edge 
    ATTGACATTC TTGTACTGGT TCATCGTAGG TGATTGTCGA CAATTAGTTG 
    TTATGTCTGA TGGAGTTGTG TCTTTTGGAG TTCAGAAGCT ACCATNCCGG 
    NCCNNAAACC NNTCNTACCC TATNGCTNTG AGTCTNACAA CAANGAAACA 
    CTACNNAGGC TNATAAGATC CGNTNGCGNT NAAAGNTCTA ATACTCAATN 
    ATACACANGA CATCAAGTCA TATNCGANTC CAAAACACTT ANCCNACCTT 
    CNTCTAGCNN NNNAAAGCT

AT4G06700.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (En/Spm), has a 5.7e-54 P-value blast match to dbj|BAB64937.1| TdcA1-ORF1-ORF2 (Daucus carota) Spm/En-like (CACTA-like)
Link
InterPro Scan - TAIR

AT4G06702.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR