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Mutant Lines
53-2969-1

53-2969-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 295535 [Map]; Strand: w
- AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: -77; Region: promoter
- AT3G01830.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -519; Region: promoter
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -519; Region: promoter

GTGGGACAGN TGACNNTCTG TCNTTTCTTN CNNTATTNGA TAANGGATNT 
GCCNNTCCTT NACTGAGGAA TANANAAACA TGGCCANTGA CCACATGTGC 
GCGTNNCGTA TTTGTCGCTC AGCATAAGTT GAGTGAGAAT NGAATGGACA 
ACACTGAAAC ACNGTTTAAT AAGGCCCAAA CGTCTCTTAG CCCAGACTAG 
GCCCACCTAA TTATATTCAA CGACCGAAAT TGTCAACCAT TGTTAACCAC 
CCAAAGAAAT AAATAAAAAA GTAAAGATAC TTATTCACAT GAAGCCTGAC 
AAGTTTCTTT TTATAGAAGA CTAGTCAACG TCAACGGAAA CTTCGTCGTC 
ATATAATATT TTAGTAACGA AATAACGATG AACTTTACTT GTTGTTCATA 
ATAAAAACAG AAATAGAAAC TTGTCAACAT AGAAGCCGCG GGAACAAAGC 
GTTTCTTCTT TTGTATGTAG CGCCGTTAAC AAATTAACAA GTCCACAATC 
CGCATGTGTT AAAAGTACGG TCTTATATTT CAACGTTTTT CAAACGTATC 
TCCTTCATCT TCTATATATT TTGTCAAACT GAACAAGTAA TAGTCTTCAA 
ACTATTATCA TTTTCTCCTC TCTCTCTCTC GCTCAAGTCT TCTTCATCGA 
TCTTCTATGA AGAGTGAGAA CGTTAACAAA CGTGATGAGT ATCAACGAGT 
CTTTAGCTGC TTG

3 prime edge [+] show sequence

Chromosome: 3; Position: 295421 [Map]; Strand: w
- AT3G01820.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon1 (5UTR)
- AT3G01830.1 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -633; Region: promoter
- AT3G01830.2 - [+] show detail - Calcium-binding EF-hand family protein
  Distance: -633; Region: promoter

TGTCCCATAA ACCTCGGCCC TCCGTCTCCG TTCAAACCCC TCTCTTTAAG 
CTCTCTCTCT TTCTGTGGCT ATTCTCTTTC TCTCTTTCTC TCTGAATCCG 
CCGCCACGCC TTCACCATGG CCTGGCTTAG CCGCGTGAGA GGAGTTTCGC 
CGGTGACAAG GCTCGCAGCG ATTCGTCGAT CTTTTGGATC AGCGGCCGCG 
TTGGAGTTTG ACTACGACTC CGATGACGAG TACTTGTACG GAGATGATCG 
CCGCCTCGCG GAACCGAGGC TTGGGTTGGA TGGATCGGGG CCGGATAGAG 
GAGTGCAGTG GGTGCTCATG GGAGCCCCTG GAGCATGGAG GCACGTCTTC 
GCCGAGAGAC TCTCCAAACT GCTTGAAGTT CCTCACATTT CCATGGGGTC 
CCTTGTCCGT CAAGAACTTA ACCCTAGATC TTCTCTCTAC AAGGAGGTGC 
TACTCTTGTC TTCTCTCTAA ATTTGAATTG ATTCGCTTTC TCTTTTACCT 
TCTTCTTTTA AAAAGCCATC TTTTGCTTTT CTTCTTTCGT TGAAAATGTT 
CACCTTTTTA TGTTGTTACT CGTTCGTGTT GATTATTTTG ATTCATAAGA 
TGTTTGATTA GTGATTATTG TCTAGATTAT GATCACCTAA TGTGAATT

AT3G01820.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenosine kinase (TAIR:AT2G37250.1); Has 9469 Blast hits to 9393 proteins in 2915 species: Archae - 95; Bacteria - 5951; Metazoa - 891; Fungi - 419; Plants - 430; Viruses - 0; Other Eukaryotes - 1683 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01830.1

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin-like 38 (TAIR:AT1G76650.3); Has 5650 Blast hits to 5606 proteins in 833 species: Archae - 0; Bacteria - 6; Metazoa - 2238; Fungi - 938; Plants - 1778; Viruses - 0; Other Eukaryotes - 690 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G01830.2

Model type: Protein coding
Short Description: Calcium-binding EF-hand family protein
Computational Description: Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: EF-hand-like domain (InterPro:IPR011992); BEST Arabidopsis thaliana protein match is: calmodulin like 37 (TAIR:AT5G42380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR