1. Home
  2. Mutant Lines
  3. 53-2980-1

53-2980-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 838715 [Map]; Strand: w
      • AT3G03520.1 - [+] show detail - non-specific phospholipase C3
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-2980-1 - 5-prime edge 
    AACACAACTC GGTTCCAATT CAAAACATAC GTACCCGTTC CAGGTTCGAT 
    CCAAGGCGAG ATTAGCAAAG CAGGAACCCT AACACCAAGC CGGTCAAACT 
    TAAAGTTATA GGGCTCAGGT CCAACTAGAC CATCAGGATT TGGGACACCA 
    ATGACTGGAG TAGGGACGTG GTCATAATAA CCACCGTGTT CATCATAAAC 
    AACAACGAAG AGAATCTCGT TCCACTGAGG ACTAGCTCTT AAGGCTTCGT 
    AGATTTCTTT GACTAGATTT TGGCCTTCAA CGACGTCGTT TTTGGGATGG 
    TCATCATTAG CTGGAGCCGA CAAAATCTTG AAGTACCTTG GTTCTATAAC 
    CACATAGTTT GGAAGCTTCC CTTCTTTGCA ATGCCTCTTG AAGCTTAAGT 
    GGTATTGATG GAAGTTGTCC ACGTACTTCA GTTTCCTCAT GTTCCTAATT 
    TAAATATGAG TCTTAGCGAT TAAGTTATTA CATTTTACAC TAATCACTTT 
    TAATGAGTAT TAAAAAAGTA TTAACTAAAC GTAAATTTTT TCCGTGGACA 
    G

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 838599 [Map]; Strand: w
      • AT3G03520.1 - [+] show detail - non-specific phospholipase C3
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-2980-1 - 3-prime edge 
    GTTGTGTTAG TTTAGACTTT AGTGTGGTAT TGTCATGTTG GTCAAAACCG 
    GTTATAATAA TTTACTGGTG ATGACATTAT TTTTTAGTGT TACACGAGCC 
    AAATGGACCA GAGCCAACGT CGCAGTTCGA ACATTCATCA ATTCCGGCAA 
    CACTGAAGAA AATATTCAAC CTCAAGAGCT TTCTTACAAA GCGTGACGAA 
    TGGGCTGGAA CACTCGATGC TGTCATCAAC CGGACCAGCC CAAGGACGGA 
    CTGCCCCGGT AAAATATATA GTTGGTTATA TAGTCCATAT TAAACGCAAT 
    ATATGTTTAA TGAGTTTTTG GATTATTACA CAGTCACATT ACCGGAACTT 
    CCTAGGGCAA GAGACATAGA CATTGGAACA CAAGAAGAAG ACGAAGATCT 
    CACTGATTTT CAAATCGAAC TGATTCAAGC AGCGGCTGTA CTAAAAGGAG 
    ATCATATCAA AGACATTTAC CCGTTTAAGC TCGCAGATAA AATGAAGGTT 
    TTGGATGCGG CTAGGTACGT AGAAGAAGCT TTCACTAGAT TCCATGGTGA 
    GTCCAAGAAG GCTAAAGAAG AAG

AT3G03520.1

Model type
Protein coding
Short Description
non-specific phospholipase C3
Curator Summary
Lysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.
Computational Description
non-specific phospholipase C3 (NPC3); FUNCTIONS IN: hydrolase activity, acting on ester bonds, Lysophosphatidic acid phosphatase activity; INVOLVED IN: cellular response to phosphate starvation, phosphate metabolic process, response to abiotic stimulus; LOCATED IN: vacuole, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C4 (TAIR:AT3G03530.1); Has 2235 Blast hits to 2112 proteins in 404 species: Archae - 32; Bacteria - 1866; Metazoa - 0; Fungi - 127; Plants - 159; Viruses - 0; Other Eukaryotes - 51 (source: NCBI BLink).
Link
InterPro Scan - TAIR