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53-2983-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 333079 [Map]; Strand: c
      • AT4G00760.1 - [+] show detail - pseudo-response regulator 8
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00770.1 - [+] show detail - unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0...
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-2983-1 - 5-prime edge 
    ATTGTATTAT TCATTTGTTT CATTCTTACA AAAGTAGAGC TAAAAAAACC 
    TGAGCTTTTA AGTCAAAGCC TTATTCAAAA ATGTTTTTGC TTTCTAATTT 
    CTAAAGCTTA AGCATTGATG TTACTAGTTT TGTGATGTTC AGGTGGACTG 
    GAATCAGTTT TGGTAGAGAG CGTTGTTAAA GTTTCGTCCA TTAACAGTCT 
    GAAGAGTTCT TCCTCAATCT GTGTGACCAC CACTTCGTGC TCCTCCTCTA 
    TCTGTTTCTC ATTCCAGTCT CGTCTTTCGA TTTCTCTAGC ACATGCTTGT 
    CTCCTCTGCT CACTTGTTCC GCGTTCAAGC TCTGATTCTC TCTTTCCCTG 
    CAACCATCCT TTTGCCTCGC ATACCAATTG GTTCTCAAAG TGTTGAGTTT 
    CGTGGAATGA GTTTGTCCTT TGCATCAATT CATCTCTGNA AATAGTCCAT 
    TATCAGATGT TCTTCGTGGA TCCAAATGGC GTGTCTTTCT TTGACTCGGT 
    TCCATAGCTG TGCTGCCTTC TCTTCAACCT CATCATTGTA TT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 333195 [Map]; Strand: c
      • AT4G00760.1 - [+] show detail - pseudo-response regulator 8
        Distance: 0; Region: exon1 (5UTR)
      • AT4G00770.1 - [+] show detail - unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0...
        Distance: 0; Region: exon3 (3UTR)
    Flanking Genome Sequence: 53-2983-1 - 3-prime edge 
    AATACAATGT ACATTAACCT CTAAAACCAT ATATATATAT ATATGTGCCT 
    AATTNATATN TCTGCAAAAA AAGATCNNTT TTTAGAAGCT AAANCCATGA 
    NCGAGTTAAA NAGNGACCTC ATTCGANACG AGCACACNAC ATAACAGAAA 
    ATAAANGGGT TANACTTAAG AAANTGTCAT TCGCNGGAAT AATTANGCNG 
    CNNGCGTGGA TTCGCGATCG CANCCATTGA AATTAAAATC CCTANATCAA 
    AGCCTATCTA TGGGTCTGCG ANACANTGAA GANGGAATTG AAAAATACAC 
    CGATAGAAGA CACTGGAGAA GAAGAAGAAG AAGTATATTG AAAAAAAANN 
    GGAAAGAAGA GGGAAATANG TNGGAGACGT NNCCGGGGGT CTNTTTCCNG 
    GNGGGNGAAA AAGCTACCAN CCNGGGCCGT NGACCACNGT GNCCNTTATA

AT4G00760.1

Model type
Protein coding
Short Description
pseudo-response regulator 8
Curator Summary
Encodes a response-regulator like protein.
Computational Description
pseudo-response regulator 8 (APRR8); FUNCTIONS IN: two-component response regulator activity, transcription regulator activity; INVOLVED IN: regulation of transcription, DNA-dependent, two-component signal transduction system (phosphorelay); LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CheY-like (InterPro:IPR011006), Signal transduction response regulator, receiver domain (InterPro:IPR001789); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00770.1

Model type
Protein coding
Computational Description
unknown protein; Has 127 Blast hits to 120 proteins in 33 species: Archae - 0; Bacteria - 2; Metazoa - 6; Fungi - 8; Plants - 62; Viruses - 3; Other Eukaryotes - 46 (source: NCBI BLink).
Link
InterPro Scan - TAIR