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53-2993-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24275947 [Map]; Strand: c
      • AT5G60340.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2993-1 - 5-prime edge 
    GGTCCCCACC TAAAAATAAC CCTAACATCT CACGGTTTCT TCCACATGTA 
    CCCTCTCTGT GCGTCTCCAA TTCCAGTTTC CGCCGCCGAA GCTAAATTTC 
    TTCAGGCTTC ATCTACCTCG ACGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24276019 [Map]; Strand: c
      • AT5G60340.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2993-1 - 3-prime edge 
    ATTTGAAAAC GGTAGAGGTA TTTTACCGAC CGTTACCGAC CGTTTTCATC 
    TGATGAATAT GTTTAATTTT TATATTAGAA AAAATACTAT TGTGTTTTTT 
    TTTTTTTNGG NANTTNNAAN TTNNAGGGGN AAAAAGGGGN TTNNNNNNAA 
    ANCNGGNANG GGNANNAAAN CCCTT

AT5G60340.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: oxidoreductase activity, ATP binding; INVOLVED IN: metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR