1. Home
  2. Mutant Lines
  3. 53-2998-1

53-2998-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8415340 [Map]; Strand: w
      • AT4G14680.1 - [+] show detail - Pseudouridine synthase/archaeosine transglycosylase-like family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2998-1 - 5-prime edge 
    TGAAAGAGGT TGGTTTGGGG AAGACGGTGG ACATGGAAGC CATTGAAGAA 
    GGAGAATCGA AAACAAAAAA ACAGAGAGGA ATGTGAATTT GTTGCTGTAG 
    TGGAGAGAAT GAGAATCTTC GAAAGTTCGA ATTTTGAAGT GGAAGATGAA 
    GTGTGAGTGG GCTTTTATAG ACCAATGTGA TTAGTTTCGT AAGAATATTG 
    ATATTAGAAT TAGGACCAGT TCAAAAATCG AACATTATCC AAGAATACGT 
    CGATGTTCGA CCAGCACTTT GCTCATGAGT CATGACGATA TCAACTTGGC 
    AAATTAATAT TGTAATCACG TGAAGGACCA TGCGACATCA TCATCATCAT 
    CATTTGTGGG GTAATAACAT AAAACTAATG CCGGCTTAAG AAAAGTGTGT 
    T

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8415216 [Map]; Strand: w
      • AT4G14680.1 - [+] show detail - Pseudouridine synthase/archaeosine transglycosylase-like family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2998-1 - 3-prime edge 
    TCTCTCAACC TCTAACAAAA TCTCACAAAT CCGATTCCGT AACCACATCC 
    ATTTCATTCC CTTCGAATTC GAAAACTCGT AGCTTAAGAA CCATCTCTGT 
    ACGAGCTGGC TTAATCGAGC CAGATGGTGG GAAACTTGTG GATCTTGTTG 
    TACCGGAACC GAGACGGCGA GAGAAGAAAC ACGAAGCGGC GGATTTGCCG 
    AGAGTGAGAT TGACGGCGAT TGATTTGCAA TGGATGCATG TGTTGAGTGA 
    AGGTTGGGCT AGTCCTCTTC GTGGGTTTAT GAGGGAATCT GAGTTCCTCC 
    AAACTCTTCA TTTCAATTTG TTGAATCTCG ATGATGGGTC TGTTGTTAAT 
    ATGTCTGTGC CTATTGTTCT TGCGATTGAT GATCAACAAA AAGCCCTAAT 
    CGGTGAATCT AAACGTGTCT CCCTTGTTGA TTCTGATGAT AATCCAATCG 
    CTATTCTCAA TGAGTAAGTT TCTCTTAGGT TGGATTAGGA TTTGAGGAAT 
    AA

AT4G14680.1

Model type
Protein coding
Short Description
Pseudouridine synthase/archaeosine transglycosylase-like family protein
Curator Summary
ATP sulfurylase
Computational Description
APS3; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Pseudouridine synthase/archaeosine transglycosylase-like (InterPro:IPR015947), Sulphate adenylyltransferase (InterPro:IPR002650); BEST Arabidopsis thaliana protein match is: ATP sulfurylase 1 (TAIR:AT3G22890.1); Has 2059 Blast hits to 2056 proteins in 649 species: Archae - 98; Bacteria - 865; Metazoa - 242; Fungi - 201; Plants - 189; Viruses - 0; Other Eukaryotes - 464 (source: NCBI BLink).
Link
InterPro Scan - TAIR