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53-3046-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24481539 [Map]; Strand: w
      • AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -811; Region: promoter
      • AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -811; Region: promoter
    Flanking Genome Sequence: 53-3046-1 - 5-prime edge
    AGAATGATAG TATTTACATG TATAGAGTCT TTCAGTACTG ACAATACAGT 
    CTAAATAAAT CCAATTACTT TTATTTCCTT TAATTTGTAT ATTGCAATTT
    TTGCAACTTC CTCAAATAAG TCACAAAAGT ACTATTATTA ATTTGCTTTT
    CATTAGTAAT ACAGATAATA GTATAAAACT AAAAAGAAAT TTAACCAAAA
    AATAAAAAAG TTATAGAAAA TGGAGGATTT ATTAGCGAAT T
  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24481441 [Map]; Strand: w
      • AT1G65810.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -713; Region: promoter
      • AT1G65810.2 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -713; Region: promoter
    Flanking Genome Sequence: 53-3046-1 - 3-prime edge
    ANNGNGACTA GNATTTATCG TGTNCNNNTG NTGANGTNCA CCNNAGTGAC 
    NNTGTGTATG GGCNNTGCTN NCATGATAGC AGGGCACTTC CCACNGNGCC
    AGGNAANGAC CTCCAACNGG CCTCGATNCA GANGCTNACC GAGCCCTNGC
    CCNTNAANNA NGNCCGTGCC CNTTATNTTG AATAAATTAA AGTTGTTAGA
    TGTTCTCAGA ACAAAAAAAG AATTTAAATT AAAAAATATT ATTCAGGCCT
    GAATAAATTA AAGTTGTAAG ATGTTATCAC ATCTGACGAA TTTTAAAACC
    GAAAATTTCG TAAGATTTTC TCAATTTATT GATTTACTCT AGGTATATAG
    AAAAAGGCTA GTAAACATGA ATTTGGAGGT TGTTATATAA ATTTAGAAAG
    AAAAATCTCA AAGGATATCT ACTCAAGGAA AATAACATAT ATCGTTCCCA
    AAAGAAAAAG GATATTAACA TAATCGAGAT TATCAAAAAC AAAATTAAAA
    CATAAATTGA GATTGCGTAA ACCTAGTCAT AAATAATCAA AGTTGTATGT
    TTCGAAATTT CTAAAGGTTA AAGTATTGAG TTTAGTATTG GCCCTTTCCT
    AGGAGGAAAA AGAAAAAGAA CAAGTCTTTT AGACTTCAAC ACTCCAAGTC
    CAAACCTTTG GTTTTCCTCC TCACAAGTAT TTCTTCATCT TCTCATTCTA
    AAAAGTTAGG CATGTGAACA AAAACGTTGA GAGG

AT1G65810.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1); Has 6257 Blast hits to 5371 proteins in 1056 species: Archae - 197; Bacteria - 1787; Metazoa - 1336; Fungi - 1200; Plants - 672; Viruses - 106; Other Eukaryotes - 959 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G65810.2

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: egg cell, seed; EXPRESSED DURING: E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G65780.1).
Link
InterPro Scan - TAIR