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Mutant Lines
53-3060-1

53-3060-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25393064 [Map]; Strand: w
  - AT5G63390.1 - [+] show detail - O-fucosyltransferase family protein
    Distance: -473; Region: promoter
  - AT5G63400.1 - [+] show detail - adenylate kinase 1
    Distance: 0; Region: exon6 (3UTR)
  - AT5G63400.2 - [+] show detail - adenylate kinase 1
    Distance: 0; Region: exon6 (3UTR)
Flanking Genome Sequence: 53-3060-1 - 5-prime edge
```
TAAACCTTGT TAAATTACCC TCTTATTATT ATCAGATTCC GAGTAAAAAA 
ACGATGAGAC AAGTTACTTA TTTGGTAAAG AGACTGCGAC AGTAGATAAT 
ATTCAGGAGT AAAAACTCTT CTCCATATTT TGAATATTAG TCGAAGAAGG 
AAAAGCGCAN GGACTAAAAG AAAAAACTGT CATTCCGC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 25392932 [Map]; Strand: w
- AT5G63390.1 - [+] show detail - O-fucosyltransferase family protein
  Distance: -341; Region: promoter

ATAGGAGATG AGTGTAGTCT CTTTCTTTAT ACAGAGCTAA GCTAATGAAC 
ATACGAACCG GGCAAGCCTT AACCGAAACG ACAACTGGTT CGCAACATAA 
AGTCACAATT TGTAAACGTG ATGTTAAATG TAACTCTTTT ATTCTAAACA 
TCTAATCACC GATTCGGGGC TAAACTTATA ATAAAATTAA ATTACNGGTC 
CTTATTCATA AGAAGATATA AAACCAGGGG GCAATTTGAA GTTTCTCGGT 
TCGTTAGTAC TTCGTACTTG GCTTCTTATT TTCCCGGGAA AACAAGAATA 
TCAGAAGTCT CTGTAACTGA ATCTCACATC TCTCTCTCTT TGCACAGAGA 
ACCAACTGAG AAACTTTCTT CAACGATCGA AAGAAGCTGC TTCAATGGCG 
AAATCGATGA GAACTATCAA AAATCCATTC TTTACTTCGC ATCCGCCATC 
TCCATTCTTC CATCTCTCTC TCCTCTTCTT CACTCCCCTG AAGAAATCAA 
GTCCCCGATA CCTAAACCAC CATCACCAAA CTCGATGCCC ACCTCCACAG 
TTTTTCCTTC TTCTACCT

AT5G63390.1

Model type: Protein coding
Short Description: O-fucosyltransferase family protein
Computational Description: O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G44500.1); Has 826 Blast hits to 816 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 826; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63400.1

Model type: Protein coding
Short Description: adenylate kinase 1
Curator Summary: encodes a protein similar to adenylate kinase.
Computational Description: adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 15080 Blast hits to 14911 proteins in 5099 species: Archae - 98; Bacteria - 9942; Metazoa - 1275; Fungi - 473; Plants - 468; Viruses - 0; Other Eukaryotes - 2824 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G63400.2

Model type: Protein coding
Short Description: adenylate kinase 1
Curator Summary: encodes a protein similar to adenylate kinase.
Computational Description: adenylate kinase 1 (ADK1); FUNCTIONS IN: copper ion binding, adenylate kinase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: Adenylate kinase family protein (TAIR:AT5G50370.1); Has 14853 Blast hits to 14693 proteins in 5114 species: Archae - 98; Bacteria - 9957; Metazoa - 1251; Fungi - 476; Plants - 450; Viruses - 0; Other Eukaryotes - 2621 (source: NCBI BLink).
Link: InterPro Scan - TAIR