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53-3064-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23782309 [Map]; Strand: c
      • AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-3064-1 - 5-prime edge 
    TCTGGGAGTT CCTTCAAATT ATATGAACCT TCCAAATTTA GCTTCTTGAG 
    TTTCGTCAGC AGCTGAATGT TAAAAATCCA CAAAACAGAA CATAAAATGA 
    GAAACCAACC CTCTTGTTCC ATATTATATG AGTCTTATTA TTTCCTTTGC 
    AAAATTATTC GACTATGAGA ATAAGCAATA ACTAACCTGA GTTCCTGGCC 
    AGAGGTACTC GAGCCGGCTA TCTTTCATCT A

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 23782425 [Map]; Strand: c
      • AT1G64070.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-3064-1 - 3-prime edge 
    CTCCCAGATC TTTCAAATGC TACAAATTTG GAGATGTTAG ATCTGAGTGT 
    TTGCCTTGCT TTGGCAGAGC TTCCATCTTC TATCAAGAAT CTTCATAAAC 
    TAGATGTGAT ATATATGGAT CTCTGCGAAA GTCTTCATAT GATACCAACT 
    AACATCAACT TGGCGTCTCT TGAGACTATG TACATGACTG GATGCCCACA 
    GTTGAAAACT TTTCCAGCAT TTTCTACAAA AATTAAGAGG CTTTATCTAG 
    TCAGAACAGG GGTAGAAGAA GTGCCTGCAT CAATTACGCA TTGCTCTCGA 
    CTTTTGAAAA TTGATTTAAG TGGCAGTCGA AATCTCAAGA GCATAACACA 
    TCTACCCTCG AGTCTACAAA CACTAGATCT CAGCTCTACT GATATTGAGA 
    TGATTGCAGA TAGTTGTATC AAAGATTTAC AGAGGTTAGA CCACCTTCAT 
    CTT

AT1G64070.1

Model type
Protein coding
Short Description
Disease resistance protein (TIR-NBS-LRR class) family
Curator Summary
Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.
Computational Description
RESISTANCE TO LEPTOSPHAERIA MACULANS 1 (RLM1); FUNCTIONS IN: transmembrane receptor activity, ATP binding; INVOLVED IN: defense response to fungus, defense response; LOCATED IN: intrinsic to membrane; EXPRESSED IN: stem, sepal, flower, carpel, seed; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT2G16870.1); Has 18146 Blast hits to 14776 proteins in 597 species: Archae - 15; Bacteria - 1058; Metazoa - 1168; Fungi - 58; Plants - 15498; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link
InterPro Scan - TAIR