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53-3071-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24217953 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -262; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -29; Region: promoter
    Flanking Genome Sequence: 53-3071-1 - 5-prime edge 
    CCGGAAGAGG TTGAAAAACT TGAAATTGAA AGAAGATCGG ACCAACGTTC 
    TCTATAATCT CAGGTTATTA TTGTCATTTA AAGCAAATCG ATTGGGCCGG 
    ACTTTAAAGC CCATTTATTT GAATTTTAAA TTCTCGTTCA CCCTTTATTG 
    GTTTGGTTTG GTTAGGATAA TATTTTTTCG GTTTGATTAA AATCATATCG 
    GTTCATCTCA C

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24218072 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -381; Region: promoter
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3071-1 - 3-prime edge 
    TCCCGCTTAC GAGGCCGGGA TATTCTATCA ACAGTCGTCT CTTCCATCGG 
    CCGAACAATT TCCGATTTAC CGACTAGGAT TTTCGCCTAC AACTTCCGAA 
    GAGATTTTCT CAGTGTAAGT TTGAAAAAAC CTAGCTATAG GATTCCGGAT 
    TTCCTAATCG TCAGATCTTG GGCTCGAAAG AGAAGCTAGA AATGGATAAG 
    GATCTCTTAG ATATCTCTGG AGAAGACGAC GAAGATAATT GGCTTCTGAA 
    GAATACGCCG AAGAAAACTA ATTCGAGCCG AGGAAAGAGT TATTTGAAAT 
    GCTCACCTCT CCAAATCCCT AGATCTAGTC GTATCGTTCC TACTCGGCCT 
    CCTTTTTCCC CAATTGGTAA GCGCTTCAAT TTCTGGTTCC CGTCCGATTT 
    CGACTATTCA

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR