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53-3076-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4214955 [Map]; Strand: c
      • AT5G13210.1 - [+] show detail - Uncharacterised conserved protein UCP015417, vWA
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3076-1 - 5-prime edge 
    TAAAAACTAA CAAAATCGGT TATACGATAA CGGTCGGTAC GGGATTTTCC 
    CATCCTACTT TCATCCCATG GAGCCATAAA GCCGCCGTGT AAAACCCTTC 
    CTTGTCGGAT TTTCCGGTGC CACGGACTCC ACGAAGATTA CAGATAAGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4215005 [Map]; Strand: c
      • AT5G13210.1 - [+] show detail - Uncharacterised conserved protein UCP015417, vWA
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3076-1 - 3-prime edge 
    ACTCCATGGT CGTCATCCCA AAACCCTAGC TTGTAACCTC GAGTCTCTTT 
    CTCAATTTGG ATACTTTAAA GATTTTCCAG AGCTTCTTTA CCGGATTCTA 
    CAAGGATCTG AAATCCGGAA GATCCAGAAA TCAGAAAGGT TCAAGAGGAA 
    AAGTGAAGCT CTAGATAGAA GAGCTCCTTA TGATGGTCAT TGTTATCATG 
    GTCGTCTTTA TGGTGGTCGT GGACGTGGAT CTAGTCGCCC CAGTAGTAAA 
    AGGAAGCCAG TGGCGACGAG GGCGTTGAGA GTAGCCAACG CTGAGAGGAA 
    GAATCAAGCC GAGAAAGCCA GAGCAAGCT

AT5G13210.1

Model type
Protein coding
Short Description
Uncharacterised conserved protein UCP015417, vWA
Computational Description
Uncharacterised conserved protein UCP015417, vWA; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP015417, vWA (InterPro:IPR011205), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP015417, vWA (TAIR:AT3G24780.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR