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53-3125-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207717 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: -69; Region: promoter
    Flanking Genome Sequence: 53-3125-1 - 5-prime edge 
    GCCGGACGAA AGAGATAATC GTCGGCGATT AGAGAAAATA AAAAGAGAAC 
    GGGGAATGAT GATGGGACGT AAGCCTGTGG GTTAGTGGCA ACAAAGGAAC 
    ATTTTAACAT TTATTTATTC CTTCCATCTT TCTCGGCAAT TGGATACCGG 
    TTTTGCCTGT TTCCGGTTTA AAGTAAAAAC GTGCTACTTG TAAATGGCTT 
    CATCTCACCT CGAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24207833 [Map]; Strand: c
      • AT5G60120.2 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
      • AT5G60120.1 - [+] show detail - target of early activation tagged (EAT) 2
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-3125-1 - 3-prime edge 
    CGTCCGGCGA TAGCTATTTT GTCTCTTCAA ATCCCCATAG ACCAATACTC 
    AACTCTTCAT CTCCATGTCT CCTCAATCTC ATTTCTCTCC TTAGTGATTG 
    AGCTTTTTCC TTCTTTCTCT TTGGTTATTA TTCCTTCTCC TCCTCCGTCG 
    TGTTTTTGAT TGATTTCAGA ATCTAAATCT CCGTTTGATT TCTCCATACT 
    CGTGCTGATT TTCACCTATG TAATGTGATT TATGAGCTCT GTTCATCTCA 
    CCTCGAC

AT5G60120.1

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.1); Has 5042 Blast hits to 4634 proteins in 238 species: Archae - 0; Bacteria - 21; Metazoa - 0; Fungi - 0; Plants - 4961; Viruses - 7; Other Eukaryotes - 53 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60120.2

Model type
Protein coding
Short Description
target of early activation tagged (EAT) 2
Computational Description
target of early activation tagged (EAT) 2 (TOE2); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2.7 (TAIR:AT2G28550.2).
Link
InterPro Scan - TAIR