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53-3128-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24393566 [Map]; Strand: w
      • AT1G65610.1 - [+] show detail - Six-hairpin glycosidases superfamily protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3128-1 - 5-prime edge 
    GNGAAAAACT AACAAAATCG GTTATACGAN NACGGGNCGG NCCGGGATCN 
    TTCCCATCCT ACTGTCATGG CAGCCCATNN TNNGNCCCTG ANTCACCNGN 
    CCANCGAAAC CTTATGCTNN TTGCGGCAGG TTACGCACGC ATACAATATC 
    ACATTTGTCA TTATTCATCA TTCATCTTTT TTTCCATATC ATCAATATTT 
    TTCACTCAGT TTTAATTCCT CTAATGCTTA CCATTTAGAT TCTAATATTT 
    TTATAGACAT GAATGATACA CGATAGAATT

AT1G65610.1

Model type
Protein coding
Short Description
Six-hairpin glycosidases superfamily protein
Computational Description
KORRIGAN 2 (KOR2); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, sepal, root, leaf, stamen; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Six-hairpin glycosidase (InterPro:IPR012341), Glycoside hydrolase, family 9, active site (InterPro:IPR018221), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 9 (InterPro:IPR001701); BEST Arabidopsis thaliana protein match is: glycosyl hydrolase 9A1 (TAIR:AT5G49720.1); Has 1630 Blast hits to 1606 proteins in 228 species: Archae - 2; Bacteria - 483; Metazoa - 181; Fungi - 17; Plants - 907; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR