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53-3131-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16055800 [Map]; Strand: w
      • AT3G44410.1 - [+] show detail - pseudogene, disease resistence protein, putative, similar to disease resistan...
        Distance: -30; Region: promoter
      • AT3G44420.2 - [+] show detail - transposable element gene
        Distance: -497; Region: promoter
    Flanking Genome Sequence: 53-3131-1 - 5-prime edge 
    AAGGGCATGT GGGAATTCCA TGAGGCTTTC AGAGTATGAC ATTTCAAATT 
    TAGAAAGACG AGACCACGAC GTGACCGACA AAGGAACATT CAAAGTACAT 
    CAGTTCGATC AAAGTGCAGA TTTTGGAGAA TTTGCGATAC ATTCAACACG 
    CTCCAAGCGT ACAGATGCAG GAGGTAAACT CAGATCATCA TAGGACACAT 
    TGATGCTTTA ATCTATCTAA CACGGATCAG TTTTTTTACT TGAATCTCTT 
    AGGTTCCACC GGATTTCTAC ATACCGGATT TTGATGAAGA CGAATGAAAC 
    CCGGATGTAC TTTGTAACAA CCCGTCCCGT GGGACCCGCC CACGTGGCCA 
    CTCTCTGCCA CGTGGCATCC CGTTGGCGCT GTAGCGCATC GACCCTAACC 
    TCTCTCCTTG GACCCTAAAG CCCACCAGGT AGGTTATTGG TGCGCTTGGC 
    GTTCCTCGAA CCCAAGACCT CACCTTTTAA CAACCTTCCA CAGGACAAAC 
    TGCTTAACCT GAAAATTCAA TGAAAATATT CTGAATATCT TCTAAAAAGA 
    GTTCTTAAGT CCAGAAAGGT CAATCTGGC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 16055684 [Map]; Strand: w
      • AT3G44410.1 - [+] show detail - pseudogene, disease resistence protein, putative, similar to disease resistan...
        Distance: 0; Region: exon1 (NonCoding)
      • AT3G44420.2 - [+] show detail - transposable element gene
        Distance: -613; Region: promoter
    Flanking Genome Sequence: 53-3131-1 - 3-prime edge 
    ATGCCCTTGA CATCATCACG GAGCTGCAGT TGAGCAAAGA TATACAAGAA 
    GTTCCTCCAT GGGTAAAGGG AATGTCTCGT TTACGTGTAC TTAGACTCTA 
    CGATTGCAAC AATCTGGTAT CACTCCCACA ACTTTCCAAT TCCCTATCTT 
    GGATAGATGC AAATAACTGT AAGTCTCTTG AGAGAATGGA TTGTTGCTTT 
    AATAATCCAA AGATTCGTCT CCAGTTCGCC AACTGCTTCA AACTGAATCA 
    AGAAGCAAGA GACCTCATCA TGCACACATC GACTTCTAGA TATACGATGT 
    TACCCGGTAC ACAAATTCCA GCATGCTTCA ATCACCGAGC TACTGCTGGA 
    GGTTTATTGC CAATCAAATT GAATGAGTCA CCTCTTCCTA AACACTTGAG 
    ATTTAAGGCT TGTATCATGC ATTGCTGGTT ATGGATACAG AA

AT3G44410.1

Model type
Pseudogene
Computational Description
pseudogene, disease resistence protein, putative, similar to disease resistance protein RPP1-WsB (Arabidopsis thaliana) gi|3860165|gb|AAC72978
Link
InterPro Scan - TAIR

AT3G44420.2

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein
Link
InterPro Scan - TAIR