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53-3148-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 13591700 [Map]; Strand: c
      • AT3G33055.1 - [+] show detail - transposable element gene
        Distance: 7726; Region: intergenic
      • AT3G33058.1 - [+] show detail - transposable element gene
        Distance: -10100; Region: intergenic
    2. Chromosome: 3; Position: 13592412 [Map]; Strand: c
      • AT3G33055.1 - [+] show detail - transposable element gene
        Distance: 8438; Region: intergenic
      • AT3G33058.1 - [+] show detail - transposable element gene
        Distance: -9388; Region: intergenic
    Flanking Genome Sequence: 53-3148-1 - 5-prime edge
    GNGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCGA TCCAAAGCTA CCANGNNGGN CCGAAAGCCA
    NTCTGTAGCN CTATGCCTTT GTGTCTTNTA ACAAGGATAC ANGTAGCTTA
    GCGCTTACAA CGATCTGGGT TGCGGNTNAA GTNCTTATAC TCAATCATAC
    ACATGACATC AAGTNATANN CGACGTCTAA AACACNAACC AACCTTCTTC
    TTGCTTCTCA AAGCT

AT3G33055.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 3.2e-282 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR

AT3G33058.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
gypsy-like retrotransposon family (Athila), has a 2.4e-112 P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana)
Link
InterPro Scan - TAIR