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53-3167-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216872 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3167-1 - 5-prime edge 
    ATGATATTAG TGATGTTCAA GATTATAATG AGGAAGATAC ATCTAGTGAA 
    GATATTACAG CTCTTGATGA TGCTGATAAT GATGATATTA ATGATGTTCA 
    AGATTATGTT GAGGAAGATA CATCTAGTGA AGATATCATA GTTATTGATG 
    ATGATGATGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216988 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: exon3 (CDS)
      • AT5G60150.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: -994; Region: promoter
    Flanking Genome Sequence: 53-3167-1 - 3-prime edge 
    AATATCATCA TCATCAAGAA CTATGAAATT TTCACTAGAT TTAACTTCTT 
    CCCCATAATC TTGATCATCA TTAAAACCAT CATCATTGTC ATCAAGAACC 
    GTGATTTGCA CTGAACTTCT AAGCCTTTTA CACGTTGCAC GACCATAGAT 
    ACAGAAATTG AAACACCAAG AGCCATCAAA CTCAAATTCT AAGAACTCTC 
    CACCTTTCAA ATCTTCGTCC TTGACTATCG TCTTCCACCC ATTAACCATA 
    ACAAATCTCT CACTATCACC ACAAAACTTC CTAAACGCCA CTTTCCAGAT 
    GTTTCCATAA ATGCTTCTAA CAATTACATT TTTAGGCAAC GACTTTGGTA 
    AAAAGCTGTT GAAAGAGATG GGTAATTCCT GAAGAGGAAG GATCTAAAAG 
    TTTCAATAAA CTAAAAATCT ACATATAACC AAAAACAGAG AGAGAAGTGT 
    ATTTTTACCA AATCATCTCC GGAATCATCA GGTAAGTACA CTTTGAAGAA 
    CTTTGGAAGA CAATCATCCA CAGAAATTCC TGTTCCAAAG CAAGAAAAAA 
    ATCAGAACAT AGGATAGGTT ATGTGATT

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60150.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR