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53-3200-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24015977 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 53-3200-1 - 5-prime edge
    TTCAGATGGC TTAGAATTTT ATTGTAATTC ATGATTTTGA TATCTGGTTT 
    TCTCCAATAG CCTGTACAAA ATCTCAATGT GTGTAATGTT TGATTTGTCT
    TGCATCTGTT TCTTGAGCCA GTTTGGTTCT GTATATATGG TAATGCTTGA
    TGCATTGTGA GCCATACATG AGTTTCCAAC ATCATTCAGA TTAACTAAGT
    GTGTTTGATC AGACTCTCGT AATAACAAGA TTTGAATCCT TGATAGATTT
    AGGATTTCAC AGGATTCCAT AACACTTACC ATTCTCTATG TTTGTTCATG
    TNCTGCTGCG AAATCTCAGG TGATCTACTG ACGTGAGTTG TCGAAGCTGA
    GAAGCCGAAG CGTTCTTATG GAAACTACTG AGAGTGCTTC AGCTTTCAAA
    CCTGTTCTAA TAACATGAAA GAGAGGATTA TAGACACTAT CAATCTCTCG
    TTTCCTTTTC TCTGTGTTTT CACAACTCTT GAACAGTGCA AATTCTACTC
    TG
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24016068 [Map]; Strand: c
      • AT5G59613.2 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: intron2 (CDS)
      • AT5G59613.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon2 (3UTR)
    Flanking Genome Sequence: 53-3200-1 - 3-prime edge
    TCTGAATGAA GTAGGTGACT TAATAAGATT CAATTAACAG ATGCAGAGAA 
    ATCACATACA TTTTCTAAAT TCATCTTCCA AATCGTAAGC TAACATTGAA
    AAAATCCAAA ATCAGATACA AATGATATGA TCGAAAGAGA AAGACATTAC
    CGCCTGTGTT GTTGGACAAA CTTGGAGTTC TTGGCGTCTT CCTCTGCAAA
    ATGAGTCAAT ACATTTACTA ATTAGGGTTT CACAACCAGC GATCCAACAA
    TCAATACTGA GACACAATAC ATCAATATAT CCGATCCGAT TCCACAAATA
    CGGATCAATT GAGGATTAGC TCTTTCATCT C

AT5G59613.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59613.2

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrial respiratory chain complex III; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46430.1).
Link
InterPro Scan - TAIR