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53-3213-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15451637 [Map]; Strand: c
      • AT2G36835.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -211; Region: promoter
      • AT2G36840.1 - [+] show detail - ACT-like superfamily protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 53-3213-1 - 5-prime edge 
    ATAAGCCACA GTGTGTATAT ATGGTTTGAG TCTTTCTTTT TGTGTTGATG 
    AGAAATTGTA AGTAGAGAAA AGCAGAACGT TGGAATGTTG TAAATGAGTA 
    CTGTGTGGGT TTCATAGTAA GAAGCTAAAG TTTTTCTCTT TGTTGTATTG 
    AGCTGAGATT TTTCTCATAT TATATGAAGT GAGTGGCTAT ATCGTAATTA 
    AACACTTAAT GAGGGGCAAA AAGTGAAGGA GAAACCTAAG AAAAATGGCG 
    ACTCTTTAAG AAGCACACGA AGACAATCCG AAAGCTGACC ACAAAGTTTT 
    CTACTTTGCA ATTTAGATAA ATCTTTCTAT CCACTTTGAG AATAATCTAC 
    C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15451772 [Map]; Strand: c
      • AT2G36835.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -346; Region: promoter
      • AT2G36840.1 - [+] show detail - ACT-like superfamily protein
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: 53-3213-1 - 3-prime edge 
    ACTCGTATCA TATTAATCTA CATACACTCA TTGCATCATA AAGTGACAAA 
    TCTTATAGCC ATACTCTTTC GATGAGTCTG AGGTTAGCTA ATGGTCCTAT 
    ACTCTGAAAG ATTTTCATTC CCAGCCCATC AAAGTTTTCC ATACTTCTTC 
    CTCTATCTTG CTTCTCGGGA TTGGTAAGCT GTCTTCTTCG TTGATCAACA 
    CTTTGTACAC CTCCCATTCT CTGTCTCCAG TCACGTGTCT TCCAATTTCA 
    GCCTAGTAAA GACATCAGAT TCATCGATAT TTAGATGATA CAAAAATGGA 
    CTGTTTTTGG TATGAGCTCG AATGATGTGA TTGGGTGAGT TATATTATAC 
    CGAGAAGATG CAGGTATCGA TCTTCTTGAG GGCAAGTGCT ATGTCGTGGA 
    AGACTTGTGG C

AT2G36835.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 26 Blast hits to 26 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G36840.1

Model type
Protein coding
Short Description
ACT-like superfamily protein
Computational Description
ACT-like superfamily protein; FUNCTIONS IN: amino acid binding; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid-binding ACT (InterPro:IPR002912); BEST Arabidopsis thaliana protein match is: ACT domain-containing protein (TAIR:AT2G39570.1); Has 798 Blast hits to 670 proteins in 149 species: Archae - 0; Bacteria - 272; Metazoa - 0; Fungi - 7; Plants - 430; Viruses - 0; Other Eukaryotes - 89 (source: NCBI BLink).
Link
InterPro Scan - TAIR