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Mutant Lines
53-3228-1

53-3228-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 23454471 [Map]; Strand: w
  - AT5G57930.1 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
    Distance: -133; Region: promoter
  - AT5G57930.2 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
    Distance: -133; Region: promoter
Flanking Genome Sequence: 53-3228-1 - 5-prime edge
```
TACTTTCATC TGATTTTTAT ACAATGTTAG TTTTGGTTAA TATCCTAAAT 
TCAAATTGGA AAGAAAACAT TAAAGGCCGG ATCGGTTATA CTACTGTGGA 
ATTTGGAAAC AAATGTTATT ATAAGTGGGC CTAATGGGAA CTTCTGCCCA 
TTAAAGGCCC ATTATTTGAA CTTATTAGCT TTAAGCTTGT CCACGATTTA 
CATTAGCTAT CTTCTTCATC TCACTCGAC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 23454421 [Map]; Strand: w
- AT5G57930.1 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
  Distance: -183; Region: promoter
- AT5G57930.2 - [+] show detail - Arabidopsis thaliana protein of unknown function (DUF794)
  Distance: -183; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTGTATTAAA CACTCAGACA GAGTAATGCA AAGAAACAAG TAAACTTACA 
AACCGAAATC GAACCGAATT GGCTAAGAAA CAAGACTAAA TCACAAGCCA 
AAGTAACAAG TAAACCGGAA AATACAAACC GAAATCGAAC CGAATTGGCT 
AGAGGTAATT CACAAGACTA AACCAAAAGG CCTAATGGAA GAAGAAGAAG 
CAAACTCCAT GCTGTGTTCA GGCTTCCCTT GTTCATGATA TGAGCTTTTA 
AAGGAGCAGC AGCAACGCTT CTGTTGTAAT TTGGAGACAA GACAATGTTT 
ACAGGAGCAG GAGCATCAAC AACGCTTCTG TTGTGATTTG GAGACAAGAC 
AACAACACGA AGCT

AT5G57930.1

Model type: Protein coding
Short Description: Arabidopsis thaliana protein of unknown function (DUF794)
Curator Summary: ACCUMULATION OF PHOTOSYSTEM ONE 2
Computational Description: ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 141 Blast hits to 119 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57930.2

Model type: Protein coding
Short Description: Arabidopsis thaliana protein of unknown function (DUF794)
Curator Summary: ACCUMULATION OF PHOTOSYSTEM ONE 2
Computational Description: ACCUMULATION OF PHOTOSYSTEM ONE 2 (APO2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF794, plant (InterPro:IPR008512); BEST Arabidopsis thaliana protein match is: Arabidopsis thaliana protein of unknown function (DUF794) (TAIR:AT1G64810.2); Has 139 Blast hits to 117 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR