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53-3233-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 117944 [Map]; Strand: w
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3233-1 - 5-prime edge 
    TACCTCGTGC TCCTTATCCA TACCATCATC ATCACCTTGT CCCCAAATCA 
    TCGAAGAAAA CCCAAAGGCT TCAGAATCAC TAGACCTAGT AAATTTGGGA 
    TCATTCCCTT GATTGATTTT CTCCGAGTGA ACATGAAACC TCCTTTTCAA 
    CTTCCTGATT TTACTCAAAA CCTGATCCTT GGAGAATCTC TCAACGATAG 
    AACTTCCGAG GAAACTACAA AACGCATCCC AATCAATTTT GGGATTGAAT 
    CCTGTCTTAG CTCTGTAATC AACTAACCCC TGAGCAATTT CGAAAATCTG 
    GTTTTAGAAA ATCACAATGC AAAACCAAAT CAAACTATAA TGGAGAAGAT 
    CAATACAATA CCTTTAAGAT AGAGAGCTCA TCTTCCTCGT TCCAGATCCG 
    GACGATCAAC GGCGGATCCA ATTTCTTCTT CTTCTTCTTC TTCTTCTTCT 
    GTTTCTTCTT CATCTCCCTC GA

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 117828 [Map]; Strand: w
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3233-1 - 3-prime edge 
    ACGAGGTAAA CGGAAATGGT GCAGCGGAAA ACCGGACTAA CGAGAGCGGG 
    GAGGAGATGT TGAAGGAGCA CGAGGAGGAA GTGGCTAATA CTGAACTTTT 
    AAATGAGAAT GGGGCAGCCA AAACAACAGA GAATGGGACT AGTAGTGGAA 
    AAGAGAGACA TGATGAGGAC AATGATGATG ATGATGAGTT ATGCGCGGTG 
    CAGGATGCAT TTGAGGCGGT GATGTCGCAA GGTTTAAGTG GTTATCAAAA 
    GAAGTTGCAG CTTGAGAAGC TGATGAACCT TGGAAATGGT AAAAGAAGAG 
    AGTTGAGTGA TGAATGGAAA GCGTTATG

AT4G00270.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 282 Blast hits to 277 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR