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53-3250-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 273300 [Map]; Strand: w
      • AT2G01600.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 690; Region: intergenic
      • AT2G01610.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: 617; Region: intergenic
    Flanking Genome Sequence: 53-3250-1 - 5-prime edge 
    GCCAAAAGGC ATTCTAGCTA CATATAGTAT AACTTCAATA AATTAATAAC 
    TTTTTAAATA TTTTAATAAT AACACAGTTT GGCATAATAA TAATAATAAT 
    AATAATAAAT GTTAGACGAG CATACAAATA TAGAAGAAAC AATCTACACA 
    GTATAATCTA CCCCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 273184 [Map]; Strand: w
      • AT2G01600.1 - [+] show detail - ENTH/ANTH/VHS superfamily protein
        Distance: 574; Region: intergenic
      • AT2G01610.1 - [+] show detail - Plant invertase/pectin methylesterase inhibitor superfamily protein
        Distance: 733; Region: intergenic
    Flanking Genome Sequence: 53-3250-1 - 3-prime edge 
    CTTTTGGCTA ACATGTTTCT CANGTATTTG TCAACTTCCG TTTTCACTGT 
    ATTCTCTAGG TTCATCTCAC TCGACGA

AT2G01600.1

Model type
Protein coding
Short Description
ENTH/ANTH/VHS superfamily protein
Computational Description
ENTH/ANTH/VHS superfamily protein; FUNCTIONS IN: phospholipid binding, clathrin binding, binding, phosphatidylinositol binding; INVOLVED IN: N-terminal protein myristoylation, clathrin coat assembly; LOCATED IN: membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Epsin-like, N-terminal (InterPro:IPR013809), ANTH (InterPro:IPR011417), ENTH/VHS (InterPro:IPR008942), Clathrin adaptor, phosphoinositide-binding, GAT-like (InterPro:IPR014712); BEST Arabidopsis thaliana protein match is: ENTH/ANTH/VHS superfamily protein (TAIR:AT1G14910.1); Has 1020 Blast hits to 994 proteins in 190 species: Archae - 0; Bacteria - 14; Metazoa - 316; Fungi - 202; Plants - 440; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01610.1

Model type
Protein coding
Short Description
Plant invertase/pectin methylesterase inhibitor superfamily protein
Computational Description
Plant invertase/pectin methylesterase inhibitor superfamily protein; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinesterase inhibitor (InterPro:IPR006501); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR:AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 850; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR