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53-3305-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24043122 [Map]; Strand: c
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-3305-1 - 5-prime edge 
    TTGCCAGTTG ATTCTACTCA ATGCATAGGT GATGCCGATG TTTTTTATAG 
    CATTCACTGA CATAAAAGAA AGATTTTGAT GTCTTGAGTA CTCTAATGTG 
    TTTATGACTT ATTTCTTTAC TAACATCAAA AAGCATAGAC CTAATATGCA 
    TAACTTGGAA AAGATAGTCA CATACCGTCG CTTTCATTTG TTTTCGGACT 
    GGGGAAACTG GATAACTGTG TAGACTTCAA AAGCATTAAG TAGAGGTGGA 
    AGAGTTGATC TGTTGGTTCA T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24037343 [Map]; Strand: c
      • AT5G59660.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: 53-3305-1 - 3-prime edge 
    CTACACCTTA GGTGGGACGG ATTAAACTGC AGCAACACAA ATATGTCCAT 
    GCCACCAAGA ATCACTACTT TGTAAGTCGA AAATTTAGTG GTACCCGCAT 
    TCTTTAAGGT CTGATAGTAA TTATGATCCT TAACACTTTG AATGTGGTTT 
    TGAACATTTC ACTAGAAACT TGTCTTCAAG TGGTTTAAAT GGAAACATAG 
    CAGCTTTCAT TCAAAGTCTC ACGCAACTAG AAACACTGTA AGTATATACC 
    ATTGTTCATA GGATTGTGAT AGTTTGGAAC AAACTTTGAT TTCTTTATGC 
    TTTCTTGCTA ACATTAGGGA CTTGTCGAAT AATAACTTGA CTGGAGAAGT 
    GCCGGACTTT CTAGGCAATA TGAAATCATT GTTGTTCATG TAAGTTTCTC 
    TCAATATATA TGCTAATGAT TTTCAAATCC CAAATCAAAT CATAGACGGT 
    TTTTATTTTG AACAGAAACT TAAGCGGGAA CAATCTTAAT GGCTCAATTC 
    CTCAAGCTCT TCAGAAAAAG GGACTAGAGC TATCGTAAGA ATCTTTCTAC 
    GTAGCTTTTG AACTTTTCTC AAGTATTACT A

AT5G59660.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: LP.04 four leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59670.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR