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53-3321-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 64304 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3321-1 - 5-prime edge 
    TTTGTAGCTC ACAAGCTCAA GATGGAGAGT CCTAAGAGAC TTCATTACTA 
    CCGGAGAAGA GATATCAACA AGAATCAAAA GTACGAGTCT CAAAGTCTCA 
    AGTGTGTTGC AAGTACACAA GCTACTCGGA AATTTGAAAG CCGTCCCCGT 
    CCCGGTATCA GCAGCAACGA GCACCAATTC ACGCAGATGT CTAGAAAACG 
    CAATTCCAAC CCAAAGTCCA ATATCTACAG GATCAACTTT TTCTGATTCA 
    AACTCAAGAC GAAAGCTCTC TAGAACCGGG GCTTTATGTG AAAGGAAAGA 
    TTTGCAAACT ATCTCTGAAA ATGTATACTG TTCTTTGTCG TCGTAATCCT 
    CAGAATCGAA CTCGAGATTT GGCACCAACT TCCAAAGAGG CCTCCATTGT 
    TTAGAAAAAA CACTCGTGGC TACGACAATC TTTGTTGGAA GAAAAGACAG 
    TATCTTTATA AGCAAAGCAT CAGGCAACTC ACTGATCCTG TCTTTACCCA 
    TAACAACTCT AATTCGCAAA CTTTCACTAG CAAAACCAAA AGAAGACAAG 
    AGTTAAAATT AGGGTTTCGA GTTTTTTTTT GTTTTGCTTG TAGAAAGAAG 
    CTACAAAGTT TGTAATACAA CAGATTCATC CTTGGCAAAA AAGATCAAAA 
    CAAGGAAGCT AAGAATCTAC GAGAAGAAAT NTNTGAGTAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 64420 [Map]; Strand: c
      • AT4G00160.1 - [+] show detail - F-box/RNI-like/FBD-like domains-containing protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-3321-1 - 3-prime edge 
    GCTACAAAGA CGAATCATCT ATCCGTAACC TTTTATCAGG CTGCCCTATT 
    CTTGAAGAAT TGCTTGTGAT TCGAGGTGAA GATTCTGATA TTGAGGTTTT 
    CACTATTGAT GAGGTCCCTT CTTTGAAGAG ATTAACGATT AATGACGACC 
    ATGATGGACA AGAGTTTTGG GGATATGTGA TAAATGCTCC TTCTTTGAAA 
    TACTTACTGA TTGAAGACTT AAGATGTCCC GGGTTTTGTC TGAATGCGCC 
    GGAGCTAATG GAGGCAAATA TTTTTGATGG TACATCTATA ACCAATGACA 
    ACTTTCTTGG ATATCTCACT TCAGTCAAAC GGTTGTTGTT GAATTTATCA 
    CCTTGGAAGG TAATTTTTCA ATCGTCAATT GACTTCTTTG TTCGTTGTCT 
    TTATACGCTA ATAATATTTG GTCTCATGAA TAGATTACAT ATCCTACTGG 
    AAGTATAATC TACCCCA

AT4G00160.1

Model type
Protein coding
Short Description
F-box/RNI-like/FBD-like domains-containing protein
Computational Description
F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT3G52680.2); Has 2232 Blast hits to 2187 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2232; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR