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53-3330-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 134143 [Map]; Strand: c
      • AT4G00310.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: intron1 (CDS)
      • AT4G00310.2 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-3330-1 - 5-prime edge
    TTTAAAGCTC CCCCGAGCAC CAACCAAAAA AAANTAAANA ANCAANCCCT 
    ANTAANAGGC GGGAGGATAA TGCTGGGCAA TAATCATGGA AGCNAAATCN
    AAANGTAATC NCNTAATGAA ANGAATNGAA TTACCTTGNG AATGANAGGC
    GGAGA
  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 134265 [Map]; Strand: c
      • AT4G00310.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: intron1 (CDS)
      • AT4G00310.2 - [+] show detail - Putative membrane lipoprotein
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-3330-1 - 3-prime edge
    AAGAACCCTA AAATTATGGA TTTTGAGATC CTGGGTCGTT TAATCTATCG 
    ATTAGGGTTA ATGGGTCGTC ATTATTTTGC TCTGTTGATT CCCATTTCGT
    TCTCTATCTC CGATTATTCT TTCTTGTTAT CACAAAGCTT CTTCGTTAAC
    TCAGTTCATT GGAGAAGAAG ATAGCNTTCA ATGGGAATGT GAGTTTGGGA
    GATTGTAATG ACACTGCTCA AAGGTAATTA TCCATTTGGT TCATCTCCCT
    T

AT4G00310.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 49 Blast hits to 49 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 36; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00310.2

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
EMBRYO SAC DEVELOPMENT ARREST 8 (EDA8); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR