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53-3344-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216501 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron4 (CDS)
    Flanking Genome Sequence: 53-3344-1 - 5-prime edge 
    ATCACATGAA CCCTTTCTTT ACAGTGAACC AACATCGGCA AATAAAATAT 
    AATATGGTAA GAAATGTGAA GAAAGTCTCA TGTCTTTTTG CATTTTCATT 
    AAAATAATGT ACCACCTTCT GTTTTATGAT GTTATCTTTG TAATGCAGCT 
    GCGCATACCA ACTAAGGTCA TAACGAAGTA TGGCTTACAC TTCCCTGAGT 
    TCATCAATTT GATTGATCCA CTCGAGAAAA ACTTTGGTAA ATTGAAGAGG 
    AAAGTTAAGG GTCAAACAAT CAAGGGATTC CGTAGTATAA TTAC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24216617 [Map]; Strand: c
      • AT5G60142.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-3344-1 - 3-prime edge 
    CATGTGATTA TCCAGATATT GTCTGTCATG CTCTCCAGAA GAACCTATCA 
    AAATTTATAC GCAAGAAAAT AAAAAGACAG TGATGCTCTC AGTCTCAGTT 
    AACTTCACAA GACAAAAGTT TCTATTATAC CTTTCTTTTT TTTCTCTGTT 
    TTGACTCCTC TCCATCTTTC TTTCTCAACA TCAGCATGAT CATCGTCACC 
    ATAATCTTGA TCATCATCAT CATCATCATC ATCATCATCA TCATCATCAT 
    CAATAACTAT GATATCTTCA CTAGATGTAT CTTCCTCAAC ATAATCTTGA 
    ACATCATTAA TATCATCATT ATCAGCATCA TCAANAGCTG TAATATCTNC 
    ACTAGATGTA TCTTCCTCAG

AT5G60142.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60130.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR