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53-3359-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22587986 [Map]; Strand: c
      • AT5G55820.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (Int...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3359-1 - 5-prime edge 
    AAGAAGGTTT GAGCTCATTT CTACTGTTTG AACGGCTTTT TGACGCTTTG 
    GCACTACTAT GATCCCCACT TTTACCTTGA GAATTACTGT TCTCCACTTC 
    TTCTCGACAC GTCTTCATCA TTTTCATCAT GCNTTAAATA ACTTTATCTC 
    ACTAACACTA TCAGACCTTA AAGAAGCAAT CCCAAAGCCT ATATCTCCAC 
    CCAGAGAAGG TTTGAGCTCA TTTCTACTGT TTGAACGGCT TTTTGACGCT 
    TTGGCACTAC TACGAAGCTC CAAAGCTTTT TGACGTGACC TTGATCTCTG 
    CATCTTAGCA AGTGATAATC TAGGGTCAAG GCAAGTGTCT GGTTCAGTTT 
    CCTCTTGACA GTAACCAAGA GGTGATGCTT TCTGCTTACA ACCAGTAGTT 
    GAGACACTTT TGGGAAACTT TTCCCCTCGG CTACATCCAG GAGATGTAGC 
    ATCAAGATTA GTTTCAACTC TCTGATTCTG GGAGTGTTCG GGAGATGGAC 
    TACTTTGATT CTCTCTGCAA TCGATTGAGA CACTTTCTGG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22587904 [Map]; Strand: c
      • AT5G55820.1 - [+] show detail - CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (Int...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: 53-3359-1 - 3-prime edge 
    AGGTCCAGGT GGAGATGTAG GCTTTGGGAT TGCTTCTTTA AGGTTTGATA 
    GTGTTAGTGA GATAAAGTTA TTAAAGCATG ATGAGAACGA TGAAGTGTGT 
    CGAGACGAAG TGGAGAACAG TAATTCTCAA GGTAAAGGAG GTGATCAGTG 
    TATTAAGATT TGTGTACCTA CAGAGTCTTT TACCTTGCAT CATGAAGTGG 
    ATTCAGTGCC AAAATCTTCA AGTGGTGATG CTTATGCTTC TATTGTACCA 
    GAATGTCTAC TCGAGTCTGG TCATGCGAAT GACATTGATA TATTACAGTC 
    CATTGAGACA ATTGATGAAG CGTCTGGCAA AGTAGATGAG CAAGTGGATG 
    ATCCCAAAAG GAGAAGTTGC AATGAAACAG CTTATCTCGA TGGAAGTACA 
    AGATCTAAAA GCTCAATTCA AGATAGCTCC AAGAGGAAAC ATCAAAAATC 
    AAGCAACTCC TTTTCTGGTA ACTTTCTGTC AACTAATTCA AATCCCTCTC 
    ACTGGGCTGA TCATGAAGTA TAATTA

AT5G55820.1

Model type
Protein coding
Computational Description
CONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR