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53-3371-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041295 [Map]; Strand: w
      • AT5G59662.1 - [+] show detail - other RNA
        Distance: -884; Region: promoter
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -199; Region: promoter
    Flanking Genome Sequence: 53-3371-1 - 5-prime edge 
    GTTTGGACTG ATCTTATATA ATTGATACCA ATGTATTGCT GAACGTGCTT 
    CTTGGTTTAC TCCTTAGTTT CCCAGAAAAA AATCATGACG TTGATGTTGG 
    GACATTGTTG TCCTCTTAAC CCTCATCTTC TTCCGTTGGT GAAGCTGCAC 
    TAGAAAACAC ATTTACCCAT TTCCACCATT GACCTGACTA AGTCTTTCTT 
    TTAGTGTGCA ATTTGGGTTT GCTAATTTAT TTACTGTTTA TATTCAACAG 
    CATAGCCAAT GGTTTTTTGA TTTTTCCTTG TGAGTTGAGA GAATATGGAG 
    GGTTCTGTTG GGCTTTTGTT GGTACTGTTA ACTTTGGCCA TCATTCATAT 
    TGTTCAAGCT CAAGACCAAC TAGGTATCAG ACATATGTCT TCTATGTACA 
    TCATTCATAT TGTTCAAGCT TCCTTCCTAT TCTTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24041137 [Map]; Strand: w
      • AT5G59662.1 - [+] show detail - other RNA
        Distance: -726; Region: promoter
      • AT5G59670.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: -357; Region: promoter
    Flanking Genome Sequence: 53-3371-1 - 3-prime edge 
    GTCCAAACAA AGATTGTCCC TTTTTGTTTA TTGTTTTTGT GTTTTTCTTT 
    GAATATTCAT TTCGCGGTAA ATACACAAAC CAAAATCAAG AAAACACTGG 
    CTGGCTATAC TGTTGAACAT AAAATTCAAA TAAATAGGCA AACCAAAATC 
    ATACACCAAA AGAAAGACTT AGTCAGATAA ATGGTGAAAA TGAGTAAATG 
    TGTTTTCTAG TGTGCAGCTT CACCAAGGTT AAGAAGACAA TGTCCCAATT 
    TTTTTGGTGA ACAAAGGAGT GAACCAAGAA GCACGTTTAG TAATAAATAT 
    TGGTATCAAT TATATAAGAC GAGTCCAAAG TCCAAACAAA GATTGTCCCC 
    TTTTGTTTAT TGTTTTTGTG TTTTTCAATG AATATCCTTT TCGTAGTAAA 
    TACAAAACCC AAATCATTCA CAAAAGAAAG ACTTCTGATA AGTCAATGGT 
    GAAAAATTGA GTAAATGTGT CATCTAGTGC AGCCTAACCC TTCACCAAGG 
    GAAGAAGATG AGGGTCAAGA GGACAACAAT GTCCCAACAT CACCGTCATG 
    AAGTTATTCT GGGAAACTAA GGAGCAGACC AAGAAGCACG TTAAGCAATA 
    AATTGTCACA TTGTAGGACA ATCGATAATA TAAGACGAGT CCCACAAGTT 
    TAGCTTCAGG TTATTAGCCT GTAATCGTTT TTTTTAATGA AATCATAACA 
    ATATTCTT

AT5G59662.1

Model type
Other RNA
Short Description
other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT5G59660
Link
InterPro Scan - TAIR

AT5G59670.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G59680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR