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53-3373-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25366566 [Map]; Strand: w
      • AT5G63270.1 - [+] show detail - RPM1-interacting protein 4 (RIN4) family protein
        Distance: -617; Region: promoter
      • AT5G63280.1 - [+] show detail - C2H2-like zinc finger protein
        Distance: -465; Region: promoter
    Flanking Genome Sequence: 53-3373-2 - 3-prime edge 
    ACTGTGCATG TGCTGAGTTA TAAACGATAA AATAAAATTA TAGTAATTTT 
    ACAGTTATAT ATCTGAAAAT GATTGCTAAA TAAATAAAAC TGATAAGTTG 
    GAATTTCTTT TTGATATTAT TGGAACTTTT GTGATATATT TGTCTCAATT 
    AACCTTTAGC GATTGATTGT TTTTTATACT CTTAACAATT AACATGTTTA 
    AGTTAAACGA TTGTGTT

AT5G63270.1

Model type
Protein coding
Short Description
RPM1-interacting protein 4 (RIN4) family protein
Computational Description
RPM1-interacting protein 4 (RIN4) family protein; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: RPM1-interacting protein 4 (RIN4) family protein (TAIR:AT3G48450.1); Has 282 Blast hits to 281 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 280; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G63280.1

Model type
Protein coding
Short Description
C2H2-like zinc finger protein
Computational Description
C2H2-like zinc finger protein; FUNCTIONS IN: zinc ion binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: zinc finger (C2H2 type) family protein (TAIR:AT5G40710.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR