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Mutant Lines
53-3384-1

53-3384-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 5; Position: 16694696 [Map]; Strand: c
- AT5G41750.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon2 (CDS)
- AT5G41750.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon2 (CDS)

GNGATAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCAT CCCCTCAAAA TCCCTCGACG GTGTGAGATT 
CAGTTTGTCT GAAACATCTG TAACAATCTT TTGGATCATC TTTGCTTCAT 
TAGCCCTAAC AAAAGCAAAA CCAAATAGAT TTGGTTGGTC TAAATTTACA 
AAACAAATTG CTTGAGAAAA ATAAAAAGGA CTAATATTCA TTGAGACATA 
CCAATTAAGA GAGTGTTCCC CAGCAATGGT AGCGACATGT TCCAAAGCCT 
TTCTCCAACG AAGAGAGTGT TCCTCCTCAT TTTTCCCTTG ACAAGTCTTC 
TCAAAAGCT

3 prime edge [+] show sequence

Chromosome: 5; Position: 16689347 [Map]; Strand: c
- AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)
- AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon3 (CDS)

GAAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTC 
CTAATGGTAG GGATGGAAGC TCACTTGAAA AGATTGAACT CTTTGTTATG 
CCTGGAAAGT GATGAAGTCA AGATGATTGG AATTTGGGGT CCAGCGGGAA 
TTGGTAAGAC TACCATTGCT AGAGCTTTAT TCGACGACAG ACTCTCTAGC 
AGTTTTCAAC TTAAATGTTT TATGGACCTC AAGGGAAGTC TTAAGGGTGG 
TGCTGACCAT GATTCCAAGT TGGGGTTGCA AAAGCAACTT CTGTCTAAGA 
TTTTGAACCA AGATGATTTG GAGATACATC ATTTAGGTGC AATCAAAGAG 
TGGCTACACA ATCGAAGAGT GCTCATCATT CTTGACGATG TAGATGATCT 
AAAGCAATTA GACGTATTGG CTGAATATAC TTCTTGGTTT GGTTCTGGCA 
GTCGGATCAT CGTTACCACA GAAGATAAGA AGATTTTGAA GGCACATAGG 
ATTCACGATA TCTACCGTGT TGATTATCCA TCCATGAAAG AAGCTCTTGA 
GATCTTATGT CTCTCTGCTT TCAAACAAAG CTCTGTACTA GATGGTTTTG 
AAGAGCTTGC CAATAAAGTA GCTGAGCTTT GCGGCAATCT TCCATTANGC 
CTTTCTGTCG TCGGTGCATC TTTGCGTGGG GAGAGCAAGC ACGAGTGGGA 
ACTTCTATTA TCTAGGATCG AATCTAGTCT TGATAGGGAT ATTGATGACA 
TATTAAGAAA ATCTTG

AT5G41740.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41740.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41750.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR