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Mutant Lines
53-3402-1

53-3402-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 24135455 [Map]; Strand: c
- AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
  Distance: 0; Region: exon1 (CDS)

CTTGATAAAC TAACAAAATC GGTTATACGA TAACGGTCGG TACGGGATTT 
TCCCATCCTA CTTTCATCTC TTCGGCAAAC TCCACAGTTC AAATACCCAG 
GACCAAGATG CTGTGTGAAA GAAATGCGAT GATCATGACG ATTTATGTTC 
ATGACTTGAG GTAAGTCTAC ACAACTACAA TGGACCGCAA AACCACACCT 
GAAGACACAT ATAAGAGAGT ATAAGTCCTT TTACCCCACA AACGTTACAA 
GTGCAGTAGA CTCCTCTTGG AAAGAAAGTA AGAGGATGCT TGTGCGTCTT 
CACATTCTCG ACAACAAGAG GTGGTGGTGA TTTGATACAA CCAATGCACA 
GTGTGAAGTT GCAGATAGAA CAATGATAAA GAATACCATG CGGTTGTTGC 
CCACATAGAA AACAAGTCTT CTTATCATTA TCTGTAAGTG ATTCAGATTC 
GACGAGCATG AGAGGATGAT CAGAGTGACA AGGATGATTT ACCTCTTTCG 
AGAGATGGAT GCAGCCCACG TGGAAGTACA ACTCGCATCC AAGACATGAA 
TAGGATGATC CAATAATTCT ATTCTTGCAA ACTTCACAAG GGGTTTTCTC 
CTGTCTTTTC TTCAGGAAGA CAAGTGGATG GTCATGGCAG ATGGGATGTT 
CAATAGCTGG CGGTGGTGGG TTCATCCCAC AAGTCAAATC CACCTTGATT 
TTACATGTGG AACAACTATA AAAGTACTTC GCTGGCTTTG TTTCTC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24135515 [Map]; Strand: c
  - AT5G59930.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-3402-1 - 3-prime edge
```
TATGCCAATT CAATGGAGCT TATTCTTGCT TAGTTTGCCC CAACTATGCA 
GTTCATTCAC GGTGTGCAAC AAGATATGAC ATATGGGATG GTGTGGAACT 
GGAAGGGAAA GCTGAGAATA TTGAGGATAT TGCCGCCATT TAAGGTGGTT 
GGGGATGACT TGATTCGTCA TT
```

AT5G59930.1

Model type: Protein coding
Short Description: Cysteine/Histidine-rich C1 domain family protein
Computational Description: Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, ZZ-type (InterPro:IPR000433), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G59940.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR