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53-3433-2

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 320490 [Map]; Strand: c
      • AT5G01830.1 - [+] show detail - ARM repeat superfamily protein
        Distance: -205; Region: promoter
    Flanking Genome Sequence: 53-3433-2 - 5-prime edge 
    CTTTGGATTT TCTTCCATNN CTACAGTTTT TTAGAATAAC ACACGCCTAC 
    ACGGCCTCGT GAGTTGTCGA GCAACACTGA TTACAATATA TAAGAAATGT 
    AAGAATGAAG ATAAGGTCTT CGTTTTGGTG ACATAAGAAT GCAACAGTTG 
    GTACAAGTTT GTTAGAGAGA ATTGATCTCG TCTTCTCTTT TTCAATATAT 
    TTAAATTATA TATACTCACA TAACTAATCA TTCTAATTTT TTCATAATTT 
    ATAATTGAAT CTGCTCTGCT GGCTCTCTCC ACTTTCCGGT GAATTATTGA 
    ATACTAGTAG TATTTCTCAA ATTATATAAC AAAATGTTTC CATTACCAAA 
    GTTAGCTTTC CTTTTATTTT AAACGAGTAG TTTCCCTTTA AAGCAAATTA 
    TGAGATGTTT GCATTTTTAA AATTTTACAC AAAAAAATTA TA

AT5G01830.1

Model type
Protein coding
Short Description
ARM repeat superfamily protein
Computational Description
ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR