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53-3435-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24430610 [Map]; Strand: w
      • AT5G60740.1 - [+] show detail - ABC transporter family protein
        Distance: -341; Region: promoter
      • AT5G60750.1 - [+] show detail - CAAX amino terminal protease family protein
        Distance: -281; Region: promoter
    Flanking Genome Sequence: 53-3435-1 - 5-prime edge
    ATGGTAATAG ATTCTTCACC AAGGAATCAT ACTATGTAAT TTACAGTTAA 
    GGCTCTGTAT TTTGATAATG TTTCTACTGT GACCTCTATA GTTTTGACAT
    TTTTGGTGCA ATATGTCAAA AAGAAAAGAT TTGTTTTTCT GAAAAATATA
    AAAATAAATT TACCAATGTG TTCTGAAGGC AATTCAGCTA TAAACTATAA
    AAGGATAATG AACAAATTGG TTTATTCATC AATAAATTGG TTTATTTTGG
    TTTAAACATC GGTTTTGTTC GATGGTCCGG TTAAGACGGA TTGTTAATTA
    TTGTCGTTGA AAATTCATCA ACTTTTTTTT GGTGAGAAAA ACTGAAAGAC
    ACAAAATCAG TTTCCTTCTC TCTCTCTGGT CACGAAAACC CCCAAATCCA
    CAGATTAATT AGGGTTTTCG ATTTCTCTGA TGAAACTGAN AANAATCTCT
    CATTAGGGTT CTTCATTCTT CANAGGGATT TCTCATATCT CTCTCATTGA
    GCTTGCTAAA GCTGAAATCT GAGTTTGAAA TTGGAATTCA NATTCCCATC
    CCATGTT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24430494 [Map]; Strand: w
      • AT5G60740.1 - [+] show detail - ABC transporter family protein
        Distance: -225; Region: promoter
      • AT5G60750.1 - [+] show detail - CAAX amino terminal protease family protein
        Distance: -397; Region: promoter
    Flanking Genome Sequence: 53-3435-1 - 3-prime edge
    ATTACCATGA CACGAGTTAG AGAAAGTCAA ACGGTCAAAT TAAAATCTGT 
    TTTCGTCTCT TTCCTCCTCA TATATCGCCA TGCCTTCCTC TCATCCATTT
    CTTGACTCTC AAGATACACA ACAATCTCTC TCTCCCCAAA AAGAAAAAGA
    AAAAAACAAA AAACAAACAA ACCCTAATTC TCTCTTTCTG TCTCCTTCAA
    TTGTCTAATG TCTCCTTGAT CCATCCTGAT CTCAAGACAA TTCTTTGCAA
    CGTTGTTTTC TTGGAAAATT TTCAGGGATG GGAAGGAGAA ATTCATATTT
    TCCAGGGAAT TTTGTTCCAT TGTTCTTCGT GTTTATCGTG TTGATTCTTC
    AGCAAGAAAT AGTGATTTGT CAAGAAGATA GAAGCTTNCA TGNNGNNNCC
    AAAGNCCATN GAGNCCCTTT GGCTTTGTGT CTTCTAACAA GGAAACACTA
    CTTAGGCTTA TAAGATGCGG TTGCGGTTTC AGTTCTTATA CTCAATCATA
    CACATGAGAT CAAGTCATAT TCGACTCCAA AACACTAACC AACCTTCTTC
    TTGCTTCTCA AAGCT

AT5G60740.1

Model type
Protein coding
Short Description
ABC transporter family protein
Computational Description
ABC transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: non-intrinsic ABC protein 12 (TAIR:AT2G37010.1); Has 368280 Blast hits to 339015 proteins in 4019 species: Archae - 6650; Bacteria - 293315; Metazoa - 9188; Fungi - 6366; Plants - 5378; Viruses - 18; Other Eukaryotes - 47365 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60750.1

Model type
Protein coding
Short Description
CAAX amino terminal protease family protein
Computational Description
CAAX amino terminal protease family protein; FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT1G14270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR